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Sep 12, 2017 09:09 AM | Joses Ho
CCMAKE on Linux does not install all binaries
Hi,
I have followed the instructions that are floating in this forum (but curiously not in the docs):
tar -xvf CMTK-3.3.1-Source.tar
cd CMTK-3.3.1-Source
mkdir build
cd build
ccmake -C ../config/gcc-x86_64-sse.cmake ../
But the only executables that end up in build/bin are:
cmtk
cmtk_functions.sh
cmtk_locking_procmail.sh
cmtk_locking.sh
correct_dwi_distortion
correct_dwi_distortion_and_motion
correct_nex_motion
groupwise_reformat
iterative_shape_averaging
munger
Executables required for registration (eg registration, warp, affine) are not installed.
What other steps do I need to take before I can successfully install all binaries?
Thanks,
Joses
PS
in the config options I set as follows:
BASH_PATH /bin/bash
BUILD_APPS ON
BUILD_CONTRIB ON
BUILD_CONTRIB_MUNGER ON
BUILD_MANPAGES ON
BUILD_SHARED_LIBS ON
BUILD_TESTING ON
CMAKE_BACKWARDS_COMPATIBILITY 2.4
CMAKE_BUILD_TYPE CMAKE_CXX_FLAGS
CMAKE_INSTALL_PREFIX /usr/local
CMTK_BUILD_DCMTK ON
CMTK_BUILD_MXML ON
CMTK_BUILD_NRRD ON
CMTK_BUILD_SQLITE ON
CMTK_BUILD_ZLIB ON
CMTK_INSTALL_BIN_DIR bin
CMTK_INSTALL_DATA_DIR share/cmtk
CMTK_INSTALL_INCLUDE_DIR include/cmtk
CMTK_INSTALL_LIB_DIR lib/cmtk
CMTK_ROOT_PATH_SRI24 CMTK_ROOT_PATH_SRI24-NOTFOUND
CMTK_USE_BZIP2 ON
CMTK_USE_CUDA OFF
CMTK_USE_DCMTK ON
CMTK_USE_FFTW ON
CMTK_USE_LZMA ON
CMTK_USE_QT OFF
CMTK_USE_SMP ON
CMTK_USE_SQLITE ON
FFTWD_OMP_LIB FFTWD_OMP_LIB-NOTFOUND
FFTWD_THREADS_LIB /usr/lib64/libfftw3_threads.so
FFTWF_OMP_LIB FFTWF_OMP_LIB-NOTFOUND
FFTWF_THREADS_LIB /usr/lib64/libfftw3f_threads.so
FFTW_INCLUDE_PATH /usr/include
FIND_EXECUTABLE /bin/find
LIBINTL_LIBRARY LIBINTL_LIBRARY-NOTFOUND
NUMDIFF_USE_UNLOCKED_IO ON
I have followed the instructions that are floating in this forum (but curiously not in the docs):
tar -xvf CMTK-3.3.1-Source.tar
cd CMTK-3.3.1-Source
mkdir build
cd build
ccmake -C ../config/gcc-x86_64-sse.cmake ../
But the only executables that end up in build/bin are:
cmtk
cmtk_functions.sh
cmtk_locking_procmail.sh
cmtk_locking.sh
correct_dwi_distortion
correct_dwi_distortion_and_motion
correct_nex_motion
groupwise_reformat
iterative_shape_averaging
munger
Executables required for registration (eg registration, warp, affine) are not installed.
What other steps do I need to take before I can successfully install all binaries?
Thanks,
Joses
PS
in the config options I set as follows:
BASH_PATH /bin/bash
BUILD_APPS ON
BUILD_CONTRIB ON
BUILD_CONTRIB_MUNGER ON
BUILD_MANPAGES ON
BUILD_SHARED_LIBS ON
BUILD_TESTING ON
CMAKE_BACKWARDS_COMPATIBILITY 2.4
CMAKE_BUILD_TYPE CMAKE_CXX_FLAGS
CMAKE_INSTALL_PREFIX /usr/local
CMTK_BUILD_DCMTK ON
CMTK_BUILD_MXML ON
CMTK_BUILD_NRRD ON
CMTK_BUILD_SQLITE ON
CMTK_BUILD_ZLIB ON
CMTK_INSTALL_BIN_DIR bin
CMTK_INSTALL_DATA_DIR share/cmtk
CMTK_INSTALL_INCLUDE_DIR include/cmtk
CMTK_INSTALL_LIB_DIR lib/cmtk
CMTK_ROOT_PATH_SRI24 CMTK_ROOT_PATH_SRI24-NOTFOUND
CMTK_USE_BZIP2 ON
CMTK_USE_CUDA OFF
CMTK_USE_DCMTK ON
CMTK_USE_FFTW ON
CMTK_USE_LZMA ON
CMTK_USE_QT OFF
CMTK_USE_SMP ON
CMTK_USE_SQLITE ON
FFTWD_OMP_LIB FFTWD_OMP_LIB-NOTFOUND
FFTWD_THREADS_LIB /usr/lib64/libfftw3_threads.so
FFTWF_OMP_LIB FFTWF_OMP_LIB-NOTFOUND
FFTWF_THREADS_LIB /usr/lib64/libfftw3f_threads.so
FFTW_INCLUDE_PATH /usr/include
FIND_EXECUTABLE /bin/find
LIBINTL_LIBRARY LIBINTL_LIBRARY-NOTFOUND
NUMDIFF_USE_UNLOCKED_IO ON
Threaded View
Title | Author | Date |
---|---|---|
Joses Ho | Sep 12, 2017 | |
Greg Jefferis | Sep 12, 2017 | |
Torsten Rohlfing | Sep 14, 2017 | |
Joses Ho | Sep 13, 2017 | |
Greg Jefferis | Sep 13, 2017 | |