users > RE: Warp output unreadable in reformatx
Dec 29, 2017  08:12 AM | Dan Xie - UCSF
RE: Warp output unreadable in reformatx
Hi Torsten,

Sorry for my delayed reply. I ran several tests (using munger script instead, not the commands that I posted earlier here) with different data sets and here is my finding: for outputs that are readable in reformatx, the output folder contains files like:

cmd.sh level-01.list level-03.list level-05.list settings studylist
level-00.list level-02.list level-04.list registration.gz statistics

While for those unreadable in reformatx, the "registration.gz" is missiing. Sometimes even everything is missing except "cmd.sh".  I was wondering what makes this happen.  I have double checked all my data format and units to make sure that they are consistent.
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RE: Warp output unreadable in reformatx
Dec 29, 2017