Dear Alfonso, dear all,

I ran a preprocessing pipeline in CONN 18a including the removal of the intial 5 scans on images containing 140 frames (1 session) at the beginning of the pipeline. However, afterwards it shows 18900 files per subject in the functional tab and also in the conditions tab. I cannot proceed, as the error comes up that the file number and the number of 1-level covariates (which correctly show 135 timepoints per subject) do not match. When I open the preprocessed files in any viewer they seem fine and only have 140 (135) frames. I checked again using only the "remove initial scans" step without any further preprocessing and the same thing happens.

This however doesn't occur when I preprocess the same data in CONN 17f. And when I open the project preprocessed in CONN 18a using CONN 17f everything seems to be fine as well.


Any idea what seems to be the problem here?

Thank you and best wishes

Julian