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help > RE: Potential bugs in preprocessing pipeline
Sep 17, 2018 09:09 AM | Pravesh Parekh - National Institute of Mental Health and Neurosciences
RE: Potential bugs in preprocessing pipeline
Dear Dr. Alfonso,
I think there may be another bug in the pre-processing pipeline. When performing slice timing correction and selecting BIDS to pick up slicing order (actually timing), the reference slice is specified as half the last slice time i.e. say the last slice was acquired at 2250ms, then the reference slice is specified as 1125ms. I am assuming that instead of this, the timing for the middle slice is what needs to be picked up.
Regards
Pravesh
I think there may be another bug in the pre-processing pipeline. When performing slice timing correction and selecting BIDS to pick up slicing order (actually timing), the reference slice is specified as half the last slice time i.e. say the last slice was acquired at 2250ms, then the reference slice is specified as 1125ms. I am assuming that instead of this, the timing for the middle slice is what needs to be picked up.
Regards
Pravesh
Threaded View
Title | Author | Date |
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Pravesh Parekh | Sep 1, 2018 | |
Pravesh Parekh | Oct 10, 2018 | |
Pravesh Parekh | Oct 4, 2018 | |
Pravesh Parekh | Sep 17, 2018 | |
Alfonso Nieto-Castanon | Sep 25, 2018 | |
Pravesh Parekh | Sep 26, 2018 | |
Alfonso Nieto-Castanon | Oct 10, 2018 | |
Pravesh Parekh | Oct 11, 2018 | |
Alfonso Nieto-Castanon | Oct 12, 2018 | |
Pravesh Parekh | Dec 6, 2018 | |
Alfonso Nieto-Castanon | Dec 9, 2018 | |
Jeff Browndyke | Dec 10, 2018 | |
Pravesh Parekh | Dec 11, 2018 | |
Pravesh Parekh | Sep 25, 2018 | |
Pravesh Parekh | Sep 12, 2018 | |
Alfonso Nieto-Castanon | Sep 3, 2018 | |
Pravesh Parekh | Sep 5, 2018 | |