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help > RE: Regarding IBSR_V2.0 dataset
May 16, 2019 02:05 PM | Andrew Worth
RE: Regarding IBSR_V2.0 dataset
Hello,
The "CMA" files like IBSR_01_CMA.tgz are basically useless because they are in a format that is hard to open. That must be why they were deleted.
The ANALYZE files are an old imaging format. See [url=https://en.wikipedia.org/wiki/Analyze_(imaging_software)]https://en.wikipedia.org/wiki/Analyze_(imaging_software)[/url]. This has been superseded by the NIfTI format, see https://nifti.nimh.nih.gov/.
There are various applications that can open the ANALYZE format such as MIPAV (https://mipav.cit.nih.gov/).
Or you can convert them into NIfTI using:
nifti_tool -infiles IBSR_01_ana.img -prefix IBSR_01.nii -copy_im
See https://sourceforge.net/projects/niftilib/.
Andy.
Originally posted by dalvinder kaur:
The "CMA" files like IBSR_01_CMA.tgz are basically useless because they are in a format that is hard to open. That must be why they were deleted.
The ANALYZE files are an old imaging format. See [url=https://en.wikipedia.org/wiki/Analyze_(imaging_software)]https://en.wikipedia.org/wiki/Analyze_(imaging_software)[/url]. This has been superseded by the NIfTI format, see https://nifti.nimh.nih.gov/.
There are various applications that can open the ANALYZE format such as MIPAV (https://mipav.cit.nih.gov/).
Or you can convert them into NIfTI using:
nifti_tool -infiles IBSR_01_ana.img -prefix IBSR_01.nii -copy_im
See https://sourceforge.net/projects/niftilib/.
Andy.
Originally posted by dalvinder kaur:
I have download IBSR_V2.0, which contains 18
subjects of IBSR_01_ANALYZE.tgz and IBSR_01parc_ANALYZE.tgz to
IBSR_18_ANALYZE.tgz and IBSR_18parc_ANALYZE.tgz. Each
IBSR_01_ANALYZE.tgz folder contains two subfolders that are images
and segmentation. But, I am unable to open the disc image files,
and also couldn't find where is the corresponding ground truth
images of IBSR dataset. Please also provide the information about
IBSR_01parc_ANALYZE.tgz folder. I couldn't find IBSR_01_CMA.tgz
file that is explained in the readme file.
Threaded View
| Title | Author | Date |
|---|---|---|
| Christian Haselgrove | Aug 16, 2007 | |
| dalvinder kaur | May 16, 2019 | |
| Andrew Worth | May 16, 2019 | |
| Hoang Anh Dau | Dec 17, 2013 | |
| dalvinder kaur | May 16, 2019 | |
| Andrew Worth | Dec 17, 2013 | |