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help > RE: Automatically quantify final outputs ("*_QCistern.nrrd") via commandline
Aug 26, 2019 04:08 PM | Martin Styner
RE: Automatically quantify final outputs ("*_QCistern.nrrd") via commandline
Can you add that this to the issue tracker as a feature request, so
that we can add the volume measurement computation as the final
step?
I also added two of our tools to the download section under the tool package (ImageStat to compute the volume, as well as convertITKformats to convert between ITK supported formats such as NIFTI and NRRD).
Martin
Originally posted by cccoleman:
I also added two of our tools to the download section under the tool package (ImageStat to compute the volume, as well as convertITKformats to convert between ITK supported formats such as NIFTI and NRRD).
Martin
Originally posted by cccoleman:
I have a solution - the
Computational Morphometry Toolkit can do this job.
https://www.nitrc.org/projects/cmtk
(For future reference, I previously tried pynrrd and np.count_nonzero , but that doesn't work)
https://www.nitrc.org/projects/cmtk
(For future reference, I previously tried pynrrd and np.count_nonzero , but that doesn't work)
Threaded View
Title | Author | Date |
---|---|---|
cccoleman | Aug 24, 2019 | |
cccoleman | Aug 25, 2019 | |
Martin Styner | Aug 26, 2019 | |
cccoleman | Aug 26, 2019 | |
Martin Styner | Aug 26, 2019 | |