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help > RE: Supplying brainmask on commandline, skullstripping still occurs as if we didn't provide the mask ???
Sep 27, 2019 01:09 PM | Martin Styner
RE: Supplying brainmask on commandline, skullstripping still occurs as if we didn't provide the mask ???
You need to turn off the skull stripping in the parameter file.
Auto_EACSF allows for automatic + user specified skull stripping
and will thus run the skull stripping if a brain mask is provided
(unless the skull stripping step is turned off in the parameters).
Martin
Martin
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Title | Author | Date |
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cccoleman | Sep 18, 2019 | |
Martin Styner | Sep 27, 2019 | |