Hi all,

I'm new to MRIcron and I am just looking for some help!


I am working with some binary masks for intracranial volume and white matter lesions and I wanted to superimpose/subtract the test masks with some reference standard masks that were provided to me. Looking at the software instructions online the only way I could find to do this was by creating an overlay between a background and overlay image. The result, however, comes out as a colour overlay rather than a binary set? (instead of only allowing me to adjust intensities from 0 to 1 it allows me to vary colour and transparency % on the background and overlay) - Any thoughts?


Thank you in advance,
Ana