help > RE: JHU.nii and JHU.txt files in C:\Program Files\MRIcron\Resources\templates
May 20, 2020  10:05 AM | Chris Rorden
RE: JHU.nii and JHU.txt files in C:\Program Files\MRIcron\Resources\templates
JHU_MNI_SS_BPM_TypeII_ver2.1
 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3358461/

I would contact the first author for more details. The rough notes I have for this are here:
  https://github.com/neurolabusc/NiiStat/blob/master/roi/read.me

The atlas has a single voxel that is clearly wrong, it is labelled as 'corticospinal tract right' but is located in the left hemisphere (at the boundary of PLIC_L and GP_L). When I next release the software I will relabel this voxel.

102|CST_R|corticospinal tract right|2
133|PLIC_L|posterior limb of internal capsule left|2
81|GP_L|globus pallidus left|1

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TitleAuthorDate
Lukas Van Oudenhove May 20, 2020
Chris Rorden May 22, 2020
Lukas Van Oudenhove May 22, 2020
RE: JHU.nii and JHU.txt files in C:\Program Files\MRIcron\Resources\templates
Chris Rorden May 20, 2020
Lukas Van Oudenhove May 22, 2020
Lukas Van Oudenhove May 22, 2020