questions > Extracting dicom "header" information with -t option
Jun 11, 2020  04:06 PM | chris hemond
Extracting dicom "header" information with -t option
Hello Chris and other DCM2niix experts,

I am trying to organize a large dataset for BIDS conversion, but in order to properly do so I need to extract the subject name and other information from the dicom header in order to match/assign proper (anonymized) identifiers.  The information I need is available from the "-t" option text file, but I don't want to convert everything to NIFTI just yet.  Is there a way to produce just a single informational text file without converting the whole dataset?  I've tried -n -1 option which works okay but is sometimes slow and I don't need the JSON files.  I'd prefer not to have to use Matlab or other scripts to read dicom headers if possible.

Thank you!

Threaded View

TitleAuthorDate
Extracting dicom "header" information with -t option
chris hemond Jun 11, 2020
Chris Rorden Jun 11, 2020
chris hemond Jun 11, 2020