open-discussion
open-discussion > RE: DTIPrep is not recognizing B0 Images
Jun 25, 2020 08:06 PM | Martin Styner
RE: DTIPrep is not recognizing B0 Images
mmm, there seems to be an issue with
DWIConvert. Which version of DWIConvert are you using? Maybe using
a newer version (e.g. from Slicer 4.10) may work?
Martin
Originally posted by Steven Meisler:
Martin
Originally posted by Steven Meisler:
Hi Martin,
Sorry for late reply; manually changing the bvecs (in addition to the bvals which I was already doing) to 0 seemed to have worked for DTIPrep to recognize baseline scans! When I convert the QCed NRRD back to NIFTI using DWIConvert, I still see that the each bval from the output of DWIConvert always hover around the maximum bvalue (differs by no more than 0.02).
Best,
Steven
Sorry for late reply; manually changing the bvecs (in addition to the bvals which I was already doing) to 0 seemed to have worked for DTIPrep to recognize baseline scans! When I convert the QCed NRRD back to NIFTI using DWIConvert, I still see that the each bval from the output of DWIConvert always hover around the maximum bvalue (differs by no more than 0.02).
Best,
Steven
Threaded View
| Title | Author | Date |
|---|---|---|
| Steven Meisler | Jun 9, 2020 | |
| Martin Styner | Jun 11, 2020 | |
| Steven Meisler | Jun 15, 2020 | |
| Martin Styner | Jun 16, 2020 | |
| Steven Meisler | Jun 25, 2020 | |
| Martin Styner | Jun 25, 2020 | |
| Steven Meisler | Jun 26, 2020 | |
| Martin Styner | Jun 26, 2020 | |
| Steven Meisler | Jun 29, 2020 | |
| Steven Meisler | Jul 1, 2020 | |
| Martin Styner | Jul 1, 2020 | |