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help > RE: Overlaying image doesn't work correctly in the "MRIcroGL" but does "MRIcron"
Oct 7, 2020 04:10 PM | Chris Rorden
RE: Overlaying image doesn't work correctly in the "MRIcroGL" but does "MRIcron"
Thanks for sharing your images. I note that one of your images
appears to have been created by SPM2 (from 2002) or earlier, and
uses the SPM-variant of the Analyze header. Please upgrade to SPM5 (from 2005) or later, which uses
the NIfTI format. SPM used the Analyze format in a non-standard way, defining an
origin. However, the origin had to be an integer, the image
orientation could not be oblique to MNI space, and different
versions of SPM made different assumptions regarding the left and
right side. NIfTI provides an unambiguous solution for these
problems. You can see how sparse the Analyze format representation
is relative to NIfTI by examining the headers with fslhd:
fslhd w3T1_29214949_brain_final.hdr
fslhd 1Rlr.nii
fslhd w3T1_29214949_brain_final.hdr
fslhd 1Rlr.nii
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Title | Author | Date |
---|---|---|
wawa6824 | Sep 29, 2020 | |
Chris Rorden | Oct 7, 2020 | |
Chris Rorden | Sep 29, 2020 | |
wawa6824 | Oct 1, 2020 | |
Chris Rorden | Oct 1, 2020 | |