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questions > RE: dcm2niix: issues with Siemens derived images
Dec 18, 2020 09:12 PM | Chris Rorden
RE: dcm2niix: issues with Siemens derived images
It sounds like issue 454 - you are running a pretty old operating system and it could be the
old compiler had bugs at high optimization levels. Why don't you
try reducing the optimization from -O3 to -O1
git clone --branch development https://github.com/rordenlab/dcm2niix.gi...
cd dcm2niix/console
g++ -O1 -g -fsanitize=address -fno-omit-frame-pointer -I. main_console.cpp nii_foreign.cpp nii_dicom.cpp jpg_0XC3.cpp ujpeg.cpp nifti1_io_core.cpp nii_ortho.cpp nii_dicom_batch.cpp -o dcm2niix -DmyDisableOpenJPEG
./dcm2niix -i y /path/to/DICOMs
git clone --branch development https://github.com/rordenlab/dcm2niix.gi...
cd dcm2niix/console
g++ -O1 -g -fsanitize=address -fno-omit-frame-pointer -I. main_console.cpp nii_foreign.cpp nii_dicom.cpp jpg_0XC3.cpp ujpeg.cpp nifti1_io_core.cpp nii_ortho.cpp nii_dicom_batch.cpp -o dcm2niix -DmyDisableOpenJPEG
./dcm2niix -i y /path/to/DICOMs
Threaded View
Title | Author | Date |
---|---|---|
Matthew Sherwood | Dec 18, 2020 | |
Chris Rorden | Dec 23, 2020 | |
Chris Rorden | Dec 22, 2020 | |
Matthew Sherwood | Dec 22, 2020 | |
Chris Rorden | Dec 18, 2020 | |
Matthew Sherwood | Dec 21, 2020 | |