help > unable to write the header...
Feb 17, 2021  12:02 PM | elen24
unable to write the header...
Dear Alfonso,

I am running in CONN with a dataset of 42 subjects (2 groups of 21) in 1 session and 2 conditions (subvocal speech and finger tapping). The analysis runs over a external memory which still has 1619.6Gb  of free space (format: NTFS).

After running smoothly the preprocessing and denoising steps, I have gotten to the first-level analysis step. It run for a couple of hours without problems (over 15 hours pipeline was expected) but it stopped somewhere at the subject20_condition1_source155.

I decided to eliminate the 1st level results and repeat it again, and the same error was shown at "D:\conn\conn_project_t1_42\results\firstlevel\SBC_01\corr_Subject010_Condition002_Source155.nii".

Could you help me out here?


I copy the error description from the conn toolbox  log and from Matlab log:


ERROR DESCRIPTION: (conn toolbox)

Error using nifti/create (line 26)
Unable to write header for "D:\conn\conn_project_t1_42\results\firstlevel\SBC_01\corr_Subject020_Condition001_Source155.nii".
Error in spm_create_vol>create_vol (line 210)
create(N);
Error in spm_create_vol (line 17)
v = create_vol(V(i));
Error in spm_write_vol (line 83)
V = spm_create_vol(V);
Error in conn_process (line 2446)
spm_write_vol(V,tanh(t));
Error in conn_process (line 47)
case 'analyses_gui_seedandroi',conn_disp(['CONN: RUNNING ANALYSIS STEP (ROI-to-ROI or seed-to-voxel analyses)']); conn_process([10,11,15],varargin{:});
Error in conn (line 7662)
else conn_process('analyses_gui_seedandroi',CONN_x.Analysis); ispending=false;
Error in conn_menumanager (line 120)
feval(CONN_MM.MENU{n0}.callback{n1}{1},CONN_MM.MENU{n0}.callback{n1}{2:end});
CONN19.c
SPM12 + DAiSS DEM FieldMap MEEGtools
Matlab v.2020b
project: CONN19.c
storage: 1619.6Gb available
spm @ D:\spm12
conn @ D:\conn


MATLAB:

Checking if data files have been edited or moved. Please wait...
Project D:\conn\conn_project_t1_42.mat loaded
Ready to run First-level Analysis processing pipeline
overwrite existing results (re-compute for all subjects/ROIs)
conditions : subvocal speech ;
local processing (run on this computer)
CONN: RUNNING ANALYSIS STEP (ROI-to-ROI or seed-to-voxel analyses)
Step 1/3: ROI-to-voxel first-level analyses
first-level data in D:\conn\conn_project_t1_42\results\firstlevel\SBC_01
Error: Permission denied
There was a problem writing to the header of
"D:\conn\conn_project_t1_42\results\firstlevel\SBC_01\corr_Subject020_Condition001_Source155.nii"
ERROR DESCRIPTION:

Error using nifti/create (line 26)
Unable to write header for "D:\conn\conn_project_t1_42\results\firstlevel\SBC_01\corr_Subject020_Condition001_Source155.nii".
Error in spm_create_vol>create_vol (line 210)
create(N);
Error in spm_create_vol (line 17)
v = create_vol(V(i));
Error in spm_write_vol (line 83)
V = spm_create_vol(V);
Error in conn_process (line 2446)
spm_write_vol(V,tanh(t));
Error in conn_process (line 47)
case 'analyses_gui_seedandroi',conn_disp(['CONN: RUNNING ANALYSIS STEP (ROI-to-ROI or seed-to-voxel analyses)']); conn_process([10,11,15],varargin{:});
Error in conn (line 7662)
else conn_process('analyses_gui_seedandroi',CONN_x.Analysis); ispending=false;
Error in conn_menumanager (line 120)
feval(CONN_MM.MENU{n0}.callback{n1}{1},CONN_MM.MENU{n0}.callback{n1}{2:end});
CONN19.c
SPM12 + DAiSS DEM FieldMap MEEGtools
Matlab v.2020b
project: CONN19.c
storage: 1619.6Gb available
spm @ D:\spm12
conn @ D:\conn

Threaded View

TitleAuthorDate
unable to write the header...
elen24 Feb 17, 2021
Alfonso Nieto-Castanon Feb 19, 2021
elen24 Feb 26, 2021
Alfonso Nieto-Castanon Feb 26, 2021
elen24 Feb 26, 2021
Alfonso Nieto-Castanon Feb 26, 2021
elen24 Feb 28, 2021