help > RE: Error in voxel-to-voxel 1st level analyses
Feb 23, 2021  02:02 PM | ksellnow
RE: Error in voxel-to-voxel 1st level analyses
Hi again, I'm back with more questions (sorry for the multiple posts, I'm new to CONN).

I think there's still something wrong happening in the 1st level analyses. The "Analysis Results" section on the 1st level analysis tab is blank and says "Analysis not computed yet" for all subjects, including those who are in the subset for this analysis. Here is the log output from running the 1st level analysis: 

2021-Feb-21 15:57 : Ready to run Voxel-to-Voxel processing pipeline
overwrite existing results (re-compute for all subjects/ROIs)
conditions : day1 ; 6mo ;
subjects : [2 3 5 6 7 8 9 10 11 12 15 16 21 22 23 24 30 36 37 39 43 44 48 51 54 59 61 62 64 66 68 70 71 72 73 76 78 79 80 81 82 83 84 85 88 89 90 92 93 95 96 97 98 102 103 104 105 106 107 108 109 110 111 112 114 116 117 119 121 123 125 126 127 129 132 135 136 138 140 142 143 146 147 148 149 150 151 155 156 158 161 162 163 164 165 169 170 171 173 175 176 177 178 179 180 181 183 185 186 187 189 192 194 196 197 198 199 200 202 203]
local processing (run on this computer)
CONN: RUNNING ANALYSIS STEP (voxel-to-voxel analyses)
Step 1/1: Voxel-to-voxel first-level analysis 1/1
first-level data in /raid-06/LS/Data/istar/analysis/rest_K2/data/KAS_COPY_iSTAR_ALLSCANS_REST/results/firstlevel/bothsubs_ICC_22121
2021-Feb-21 16:31 : processed 240 files
Saving file
saved /raid-06/LS/Data/istar/analysis/rest_K2/data/KAS_COPY_iSTAR_ALLSCANS_REST.mat
Done
ERROR DESCRIPTION:

Error using spm_vol>spm_vol_hdr (line 80)
File "/raid-06/LS/Data/istar/analysis/rest_K2/data/KAS_COPY_iSTAR_ALLSCANS_REST/results/firstlevel/bothsubs_ICC_22121/BETA_Subject001_Condition001_Measure001_Component001.nii" does not exist.
Error in spm_vol (line 61)
v = spm_vol_hdr(deblank(P(i,:)));
Error in conn (line 9813)
CONN_h.menus.m_results.Y=spm_vol(char(filename));
Error in conn (line 8603)
else conn gui_results_v2v;
Error in conn_menumanager (line 121)
feval(CONN_MM.MENU{n0}.callback{n1}{1},CONN_MM.MENU{n0}.callback{n1}{2:end});
CONN20.b
SPM12 + DEM FieldMap MEEGtools
Matlab v.2019b
project: CONN17.f
storage: 22726.7Gb available
spm @ /raid-07/sharedapps/LS/psych_imaging/matlab_toolboxes/08.17.2015/spm12
conn @ /raid-07/sharedapps/LS/psych_imaging/matlab_toolboxes/08.17.2015/conn_0.20b

and here is the log output when I try to select a subject to preview the results in the 1st level tab:

2021-Feb-21 17:06 : ERROR DESCRIPTION:

Error using load
Unable to read file '/raid-06/LS/Data/istar/analysis/rest_K2/data/KAS_COPY_iSTAR_ALLSCANS_REST/results/preprocessing/ROI_Subject002_Condition001.mat'. No such file or directory.
Error in conn (line 7877)
CONN_h.menus.m_analyses.X1=load(filename);
CONN20.b
SPM12 + DEM FieldMap MEEGtools
Matlab v.2019b
project: CONN17.f
storage: 22726.7Gb available
spm @ /raid-07/sharedapps/LS/psych_imaging/matlab_toolboxes/08.17.2015/spm12
conn @ /raid-07/sharedapps/LS/psych_imaging/matlab_toolboxes/08.17.2015/conn_0.20b

What am I doing wrong? I thought I had loaded the ROIs and covariates properly in the set up, but maybe I missed something?

Thanks again,

Kyrie

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TitleAuthorDate
ksellnow Feb 19, 2021
Alfonso Nieto-Castanon Feb 20, 2021
ksellnow Feb 20, 2021
Alfonso Nieto-Castanon Feb 20, 2021
RE: Error in voxel-to-voxel 1st level analyses
ksellnow Feb 23, 2021
ksellnow Feb 26, 2021