Hi everyone!

I am running into an error with visualizing my 3dANOVA3 f-stat test in MRIcronGL. 

In AFNI, with setting p = 0.005 and a cluster threshold, 2 clusters are produced with peak f-stats of 9.63 and 9.75. 

I want to load my stats file (3dANOVA3.ples.psc.Diet_by_Food.UM.obese.15subjects.reward_mask+tlrc.HEAD) produced from AFNI with contrasts/sub-bricks.


Below is a brief script:

import gl
gl.resetdefaults()
gl.loadimage('TT_N27+tlrc')
#open overlay: show f-stat
gl.overlayload('/Users/#username/Desktop/CFRdata/New_CFR_files/3dANOVA3.ples.psc.Diet_by_Food.UM.obese.15subjects.reward_mask+tlrc.HEAD[Diet_Effect:F-stat]')
gl.minmax(1, 0, 10)

After the script is run, I want to use sub-brick 2/48 (the second in the file) called "Diet_Effect:F-stat" and I select this after the script is run. Then, the range goes from 0-10 to 0-0.0012. (Attached screenshot)

I have tw questions:
1. How do I indicate what sub-brick to select in the script?
2. Why does the min and max not display they values I see in AFNI?

Thank you so much for your help!