help > RE: MRIcron plotting height threshold not peak-level T
Aug 19, 2021  12:08 PM | Chris Rorden
RE: MRIcron plotting height threshold not peak-level T
I am happy that my old software is mature and remains popular. However, MRIcron has not been updated in the last decade. You may want to try out MRIcroGL that leverages recent advances in computers:
  https://www.nitrc.org/plugins/mwiki/index.php/mricrogl:MainPage
I suspect with your overlay, you simply have to set the minimum and maximum values for the layer for the desired contrast. The algorithm that guesses the default contrast when loading an image does not know your intention, and may not always be ideal. I would suggest the notes on the Layers in the manual
  https://people.cas.sc.edu/rorden/mricron/main.html

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pzg20 Aug 19, 2021
RE: MRIcron plotting height threshold not peak-level T
Chris Rorden Aug 19, 2021