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questions > RE: Could you please help to retrive slice timing from DICOM header?
Jun 22, 2022 02:06 PM | Chris Rorden
RE: Could you please help to retrive slice timing from DICOM header?
dcm2niix handles converting DICOM to NIfTI, so MINC is out of
scope. You may want to contact the MINC team. Vladimir Fonov
provided a talk on the MINC format, so he may be a good contact
https://nipy.discourse.group/t/data-format-pro-con-meeting-monday-14-march-15-00-edt/122
For Siemens VA-VE DICOMs, the slice timing is in the proprietary CSA header
https://nipy.org/nibabel/dicom/siemens_csa.html
Specifically, you will want to extract the `MosaicRefAcqTimes` tag.
Your data is from ~2004 (VA25). The oldest archival dataset I have is from 2007 (VB12). Therefore, I am not sure if VA25 includes the CSA header
https://www.nitrc.org/plugins/mwiki/index.php/dcm2nii:MainPage#Archival_MRI
https://nipy.discourse.group/t/data-format-pro-con-meeting-monday-14-march-15-00-edt/122
For Siemens VA-VE DICOMs, the slice timing is in the proprietary CSA header
https://nipy.org/nibabel/dicom/siemens_csa.html
Specifically, you will want to extract the `MosaicRefAcqTimes` tag.
Your data is from ~2004 (VA25). The oldest archival dataset I have is from 2007 (VB12). Therefore, I am not sure if VA25 includes the CSA header
https://www.nitrc.org/plugins/mwiki/index.php/dcm2nii:MainPage#Archival_MRI
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Title | Author | Date |
---|---|---|
zhengchen cai | Jun 22, 2022 | |
Chris Rorden | Jun 22, 2022 | |
zhengchen cai | Jun 22, 2022 | |