help > RE: /tmp/ directory issues on local
Jan 23, 2025  09:01 PM | Christopher Schwarz - Mayo Clinic
RE: /tmp/ directory issues on local

Sun,


I think the issue is the .gz inputs. Try running gunzip on the file first, and I think that will solve your issue. We didn't set it up to support .gz inputs, but this would be a good enhancement for us to add in the future. Unrelatedly, you shouldn't need to run this as root; you could remove the sudo. The /tmp directories are because you're getting print messages from inside the Docker instance. It's not /tmp on your filesystem but inside the Docker. 


Let me know if that helps.


Best regards,
Chris Schwarz

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Sun Sar Jan 23, 2025
RE: /tmp/ directory issues on local
Christopher Schwarz Jan 23, 2025