/data/qball20091006/dti3000120003file:/data/qball20091006/dti3000/falsexmlC:\catnapGC\aaaaOut.txt0FILEFile CollectionfalsetrueFile CollectionfalsetruetrueFile Collectionfalsetruetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Mult-Component Volume FileCollectionfalsetrueMult-Component Volume FileCollectionfalsetruetrueMult-Component Volume FileCollectionfalsetrueextractAllComponents70.0150.0391.0116.0391.0116.0150.070.0UNKNOWNextractAllComponentsedu.jhu.ece.iacl.plugins.utilities.volume.MedicAlgorithmExtractFileCollectionComponentstrueAlgorithm Informationfalsetrue3-10000000001000000000Dimension to Extractfalsetruetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Volumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetrueVolumes OutfalsetruetrueVolumes Outfalsetruetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Source VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetrueSource VolumesfalsetruetrueSource VolumesfalsetrueFileColReg70.0252.0137.0382.0137.0382.0252.070.0John Bogovicbogovic@jhu.edu1.1.1.1 Extract Components of each input volume. Organize the output as a FileCollectionhttp://sites.google.com/site/jhupami/Johns Hopkins UniversityFileColRegedu.jhu.ece.iacl.plugins.registration.MedicAlgorithmEfficientFileCollectionRegistrationtrueAlgorithm Informationfalsetruetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Target Volumefalsetrue-1-1-11tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk24Mean B0 volumefalsetrueMean_B070.0150.0232.0255.0232.0255.0150.070.0RCBennett Landmanlandman@jhu.eduJohn Bogovicbogovic@jhu.edu1.5 Registers (6 dof) and averages all minimally diffusion weighted (b0) to the first b0. Registration is optional.http://www.nitrc.org/projects/jist/Johns Hopkins UniversityMean_B0edu.jhu.ece.iacl.plugins.dti.ComputeMeanB0falseAlgorithm Informationfalsetruetruetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Input Slab Collectionfalsetrue-1graddpf0Table of diffusion weighting directionsfalsetruegrad0Table of Gradient DirectionsfalsetrueCombine_Gradient_Table_Lists70.0150.0218.0134.0218.0134.0150.070.01.3 Combine_Gradient_Table_Listsedu.jhu.ece.iacl.plugins.dti.DWICombineGradTablesfalseAlgorithm Informationfalsetruetruetxtdpfgrad0Gradient Tablesfalsetrue0File CollectionfalsetrueFile CollectionfalsetruetrueFile CollectionfalsetrueC:\catnapGC\aaaaOut.txtcsvtxt0file:/data/qball20091006/grads.txtList Filefalsetrue001000000Offset Indexfalsetrue00100000Start Entryfalsetrue-1-1100000End Entryfalsetruefilecollectionlist70.0150.0194.08.0194.08.0150.070.0FileBasefilecollectionlistfalsetrueBasefilecollectionlistfalsetrue-1Execution Timefalsetrueedu.jhu.ece.iacl.plugins.dti.DWICombineGradTables1.1eb5363a1-64ac-425b-97a6-9c9c5d087d5aAlgorithmtruetrueDTIIACLCombine_Gradient_Table_Listsfalsetrueedu.jhu.ece.iacl.plugins.dti.DWICombineGradTables1.1c8a856bd-9fe2-4b6d-8b9f-2ac7cc0c02c9AlgorithmtruetrueBaseCombine_Gradient_Table_Listsfalsetruegraddpf0Table of diffusion weighting directionsfalsetrueCompute_Mean_DW70.0150.0533.0261.0533.0261.0150.070.0Bennett Landmanlandman@jhu.eduJohn Bogovicbogovic@jhu.edu1.3 Averages all diffusion weighted (DW, not b0). Registration (12 dof) to the first b0 is optional.http://www.nitrc.org/projects/jist/Johns Hopkins UniversityCompute_Mean_DWedu.jhu.ece.iacl.plugins.dti.ComputeMeanDWfalseAlgorithm Informationfalsetruetruetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Input Slab Collectionfalsetrue-1b0Table of b-valuesfalsetrueb0Table of b-valuesfalsetruecombinebvals70.0150.016.0120.016.0120.0150.070.01.3 combinebvalsedu.jhu.ece.iacl.plugins.dti.DWICombineBvalTablestrueAlgorithm Informationfalsetruebtxtlstbs0b0 Valuesfalsetrueb0 Valuesfalsetruetrueb0 Valuesfalsetrue0File CollectionfalsetrueFile CollectionfalsetruetrueFile CollectionfalsetrueC:\catnapGC\aaaaOut.txtcsvtxt0/data/qball20091006/bs.txtList Filefalsetrue001000000Offset Indexfalsetrue00100000Start Entryfalsetrue-1-1100000End Entryfalsetruefilecollectionlist70.0150.017.013.017.013.0150.070.0FileBasefilecollectionlistfalsetrueBasefilecollectionlistfalsetrue-1Algorithm Calculation19:00:0219:00:02162516:37:3816:37:3862Execution Timefalsetrueedu.jhu.ece.iacl.plugins.dti.DWICombineBvalTables1.1a6a8224f-abd7-4359-8a06-878dbb83354bAlgorithmtruetrueIACL.DTIBasecombinebvalsfalsetrueedu.jhu.ece.iacl.plugins.dti.DWICombineBvalTables1.1a235ff9b-7ee4-4483-be7b-dbd68facf88aAlgorithmtruetrueBasecombinebvalsfalsetrueb0Table of b-valuesfalsetrue-1b0Table of b-valuesfalsetrueTensor_Estimation_LLMSE70.0150.0106.0571.0106.0571.0150.070.0http://sites.google.com/site/bennettlandman/Bennett Landmanlandman@jhu.eduLandman BA, Farrell JA, Jones CK, Smith SA, Prince JL, Mori S. Effects of diffusion weighting schemes on the reproducibility of DTI-derived fractional anisotropy, mean diffusivity, and principal eigenvector measurements at 1.5T. Neuroimage 2007;36(4):1123-1138.Basser, PJ, Jones, DK. "Diffusion-tensor MRI: Theory, experimental design and data analysis - a technical review." NMR Biomed 2002; 15(7-8):456-671.3 Log-linear minium mean squared error tensor estimation.http://www.nitrc.org/projects/jist/Johns Hopkins University, Department of Biomedical EngineeringTensor_Estimation_LLMSEedu.jhu.ece.iacl.plugins.dti.DWITensorEstLLMSEfalseAlgorithm Informationfalsetruetruetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20DWI and Reference Image(s) Data (4D)falsetruetruetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Output Combined SlabsfalsetrueVolCollect_to_Combined4DSlabCollect70.0150.0116.0470.0116.0470.0150.070.0Bennett Landmanlandman@jhu.eduJohn Bogovicbogovic@jhu.edu1.7Converts VolumeCollection to CombinedSlabCollection.Converts VolumeCollection to CombinedSlabCollection.http://www.nitrc.org/projects/jist/Johns Hopkins UniversityVolCollect_to_Combined4DSlabCollectedu.jhu.ece.iacl.plugins.utilities.volume.VolumeCollectionToCombinedSlabCollectionfalseAlgorithm Informationfalsetruetruetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Input Volume Filesfalsetruetruetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Registered Volumesfalsetrue-141100Number of SlabsfalsetrueExecution Timefalsetrueedu.jhu.ece.iacl.plugins.utilities.volume.VolumeCollectionToCombinedSlabCollection1.1fc2b1684-63f6-4a87-89a1-0d7ed25012f7AlgorithmtruetrueUtilities.VolumeIACLVolCollect_to_Combined4DSlabCollectfalsetrueedu.jhu.ece.iacl.plugins.utilities.volume.VolumeCollectionToCombinedSlabCollection1.1bf0a958e-a7ab-480c-bd7e-1086ba459751AlgorithmtruetrueBaseVolCollect_to_Combined4DSlabCollectfalsetrue-1graddpf0Table of diffusion weighting directionsfalsetruegrad0Corrected Gradient Tablefalsefalse-1falsetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Mask Volume to Determine Region of Tensor Estimation (3D)falsetrueYesNo0Attempt to estimate tensors for voxels with missing data?falsetruetruetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Tensor (xx,xy,xz,yy,yz,zz)falsetruetruetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Input Slab CollectionfalsetrueCombined4DSlabCollect_to_VolCollect70.0150.094.0644.094.0644.0150.070.0Bennett Landmanlandman@jhu.eduJohn Bogovicbogovic@jhu.edu1.5http://www.nitrc.org/projects/jist/Johns Hopkins UniversityCombined4DSlabCollect_to_VolCollectedu.jhu.ece.iacl.plugins.utilities.volume.CombinedSlabCollectionToVolumeCollectionfalseAlgorithm InformationfalsetruetrueUse 4D Outputfalsetruefalsetiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp20Output FileVolume Collectionfalsetrue-1-1-11tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk244D Output (optional)falsefalse-1-1-16tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk24Tensor Volume (4D)falsetrueTensor_Compute_DTI_Contrasts70.0150.0188.0723.0188.0723.0150.070.0http://sites.google.com/site/bennettlandman/Bennett Landmanlandman@jhu.eduBasser, PJ, Jones, DK. "Diffusion-tensor MRI: Theory, experimental design and data analysis - a technical review." NMR Biomed 2002; 15(7-8):456-671.4 Estimates tensor contrasts.By default, estimates Mean Diffusion (MD), Fractional Anisotropy (FA), and the primary eigenvector (VEC1).Can optionally output all eigenvalues/vectors, as well as Relative Anisotropy (RA), and Volume Ratio (VR).http://www.nitrc.org/projects/jist/Johns Hopkins University, Department of Biomedical EngineeringTensor_Compute_DTI_Contrastsedu.jhu.ece.iacl.plugins.dti.DWITensorContrastsfalseAlgorithm Informationfalsetrue<none>RA.VR0Additional Anisotropies:falsetrue<none>Eigen vectors/values0Additional Eigen-Contrasts:falsetrue-1-1-11FLOATtiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk24FAfalsetrue-1-1-11tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk16Scalar Weight Volume (3D)falsetrueTensor : Compute Color Encoded Map70.0150.0170.0827.0170.0827.0150.070.0http://sites.google.com/site/bennettlandman/Bennett Landmanlandman@jhu.eduBasser, PJ, Jones, DK. "Diffusion-tensor MRI: Theory, experimental design and data analysis - a technical review." NMR Biomed 2002; 15(7-8):456-671.1.1.1 Create an RGB colormap image from a scalar intensity weighted by a vectorUse a scalar volume (intensity in [0,1] to weight a vector volume (4-D, 4th dimension = x,y,z, in [-1 1]) to create a single RGB color volume. This is typically used with an FA weight an PEV vector.http://sites.google.com/site/jhupami/Johns Hopkins University, Department of Biomedical EngineeringTensor : Compute Color Encoded Mapedu.jhu.ece.iacl.plugins.dti.DWITensorColorEncodedMaptrueAlgorithm Informationfalsetrue-1-1-13tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk16Vector direction to encoded color (4D)falsetrue-1-1-13tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk24VEC1falsetrue-1-1-1-11COLORtiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk16RGBfalsetrueExecution Timefalsetrueedu.jhu.ece.iacl.plugins.dti.DWITensorColorEncodedMap1.1693ccea4-738d-40a6-bbb0-d08998ee2c53AlgorithmtruetrueIACL.DTIBaseTensor : Compute Color Encoded Mapfalsetrueedu.jhu.ece.iacl.plugins.dti.DWITensorColorEncodedMap1.137fd4eaa-194e-4486-96b0-ca44b491861aAlgorithmtruetrueBaseTensor : Compute Color Encoded Mapfalsetrue-1-1-1-11tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk24MDfalsetrue-1-1-11tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk24RAfalsefalse-1-1-11tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk24VRfalsefalse-1-1-13tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk24Evalsfalsefalse-1-1-13tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk24VEC2falsefalse-1-1-13tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk24VEC3falsefalseExecution Timefalsetrueedu.jhu.ece.iacl.plugins.dti.DWITensorContrasts1.16efe45df-c4cf-4348-8b78-bfcf6fe21b9bAlgorithmtruetrueDTIIACLTensor_Compute_DTI_Contrastsfalsetrueedu.jhu.ece.iacl.plugins.dti.DWITensorContrasts1.172671bf2-612c-411f-8690-38eef0a2b8eaAlgorithmtruetrueBaseTensor_Compute_DTI_Contrastsfalsetrue-1Execution Timefalsetrueedu.jhu.ece.iacl.plugins.utilities.volume.CombinedSlabCollectionToVolumeCollection1.1e8f732d4-6644-47e8-87a9-695e1912b389AlgorithmtruetrueUtilities.VolumeIACLCombined4DSlabCollect_to_VolCollectfalsetrueedu.jhu.ece.iacl.plugins.utilities.volume.CombinedSlabCollectionToVolumeCollection1.121763949-5e54-4a34-9c20-5220394b0db8AlgorithmtruetrueBaseCombined4DSlabCollect_to_VolCollectfalsetrue-1Execution Timefalsetrueedu.jhu.ece.iacl.plugins.dti.DWITensorEstLLMSE1.1653e8fcd-e686-466a-8083-c59789d05647AlgorithmtruetrueModeling.DiffusionIACLTensor_Estimation_LLMSEfalsetrueedu.jhu.ece.iacl.plugins.dti.DWITensorEstLLMSE1.1d15d1914-d447-4f7e-a171-da1473f8c96eAlgorithmtruetrueBaseTensor_Estimation_LLMSEfalsetrue-1-1falseRegister to first b0?falsetrue-1-1-11tiftifflsmstkjpegjpgbmpgifpictpicpngpsddibtgaxbmxpmxmlpcxicocurmghmgzrawimgniinhdrnrrdimadcmbinmapmncaviimcolyqtmovheadbrikicsidshdrspmfitsdm3tmgmrcwusiggednologctinfoinfo~voiafniparparv2recfrecjp2vtk24Mean DW volumefalsetrueExecution Timefalsetrueedu.jhu.ece.iacl.plugins.dti.ComputeMeanDW1.195d9c329-610c-43a6-8efd-57ef9c60dfe0AlgorithmtruetrueDTIIACLCompute_Mean_DWfalsetrueedu.jhu.ece.iacl.plugins.dti.ComputeMeanDW1.1aeb036da-a70a-49f8-b6bc-044f407ab931AlgorithmtruetrueBaseCompute_Mean_DWfalsetrue-1grad0Gradient TablefalsefalsefalseGradient Tablefalsetrue-1-1trueRegister b0's ?falsetrueExecution Timefalsetrueedu.jhu.ece.iacl.plugins.dti.ComputeMeanB01.11217fc1d-0285-42f3-b775-1f231f662e2bAlgorithmtruetrueDTIIACLMean_B0falsetrueedu.jhu.ece.iacl.plugins.dti.ComputeMeanB01.1fa2c4885-7753-4ef0-9403-ccef15e745ddAlgorithmtruetrueBaseMean_B0falsetrue-1Rigid - 6Global rescale - 7Specific rescale - 9Affine - 123Degrees of freedomfalsetrueCorrelation ratioLeast squaresNormalized cross correlationNormalized mutual information0Cost functionfalsetrueTrilinearBspline 3rd orderBspline 4th orderCubic LagrangianQuintic LagrangianHeptic LagrangianWindowed sinc0Registration interpolationfalsetrueTrilinearBspline 3rd orderBspline 4th orderCubic LagrangianQuintic LagrangianHeptic LagrangianWindowed sincNearest Neighbor0Output interpolationfalsetrueAllXYZ0Apply rotationfalsetrue-30.0-360.0360.0Minimum anglefalsetrue30.0-360.0360.0Maximum anglefalsetrue15.00.0360.0Coarse angle incrementfalsetrue6.00.0360.0Fine angle incrementfalsetrue10-10000000001000000000Multiple of tolerance to bracket the minimumfalsetrue2-10000000001000000000Number of iterationsfalsetrue3-10000000001000000000Number of minima from Level 8 to test at Level 4falsetruetrueUse the max of the min resolutions of the two datasets when resamplingfalsetruetrueSubsample image for speedfalsetruefalseSkip multilevel search (Assume images are close to alignment)falsetruetruemtx0Transformation MatricesfalsetrueExecution Timefalsetrueedu.jhu.ece.iacl.plugins.registration.MedicAlgorithmEfficientFileCollectionRegistration1.168dbadcc-b0d5-46af-972a-1fd47072d2acAlgorithmtruetrueBaseMainfalsetrueBaseAdvancedfalsetrueIACL.RegistrationBaseFileColRegfalsetrueedu.jhu.ece.iacl.plugins.registration.MedicAlgorithmEfficientFileCollectionRegistration1.17d1df9c8-3fc3-4d73-9b8f-15a4310c3981AlgorithmtruetrueBaseFileColRegfalsetrue-1Algorithm Calculation19:00:0319:02:10126860226215:38:5515:43:59303922Execution Timefalsetrueedu.jhu.ece.iacl.plugins.utilities.volume.MedicAlgorithmExtractFileCollectionComponents1.16db97641-90aa-44a8-bffb-13fb92b63e05AlgorithmtruetrueIACL.Utilities.VolumeBaseextractAllComponentsfalsetrueedu.jhu.ece.iacl.plugins.utilities.volume.MedicAlgorithmExtractFileCollectionComponents1.15a3b71d5-7c2d-4276-96f5-5b720f1ff2d3AlgorithmtruetrueBaseextractAllComponentsfalsetrue-1csvtxt0/data/qball20091006/recs.txtList Filefalsetrue001000000Offset Indexfalsetrue00100000Start Entryfalsetrue-1-1100000End Entryfalsetruefilecollectionlist70.0150.0363.06.0363.06.0150.070.0FileBasefilecollectionlistfalsetrueBasefilecollectionlistfalsetrue