
The current version of the PickAtlas software is version 2.2.
The version number appears at the top of the PickAtlas Tool.

Bug Fixes:


5-23-03
	Version number added to title bar
	patched files:
		wfu_pickatlas.fig

	Problem with cell2mat toolbox dependency in Matlab 6.1
	patched files:
		wfu_pickatlas.m
		wfu_get_atlas_list.m
		wfu_structread.m
		wfu_structwrite.m
		wfu_cell2mat.m

7-14-03
	Remove hard coded offset for shape atlas and template size
		wfu_pickatlas.m
		wfu_get_atlas_list.m
	Activated FDR option
		wfu_spm_getSPM2.m

New functions:


7-11-03
	Shapes function added (user can generate custom shapes of sphere and box)
	patched files:
		wfu_pickatlas.fig
		wfu_pickatlas.m
		wfu_get_atlas_list.m	

8-12-03
	Added mapped mask for FDR
	patched files:
		wfu_spm_getSPM2.m
		wfu_spm_getSPM99.m


8-13-03	
	Corrected mask volume voxel computations based on SVC.m (differs from SPM99 version).Now identical to using SVC with mask image. patched files:
		wfu_spm_getSPM2.m
10-28-03
	Fixed shape generation bug. patched files:
		wfu_get_atlas_list.m

1-15-04
	Fixed coordinate conversion bug
	patched files:
		wfu_pickatlas.m

1-30-04
	The GUI no longer gets clipped when using Windows XP at screen resolution 1024x768 (or greater).
	patched files:
		wfu_pickatlas.m
		wfu_pickatlas.fig

5-19-04
	If using the included aal atlas, please also reference:
		Tzourio-Mazoyer N, Landeau B, Papathanassiou D, Crivello F, Etard O, Delcroix N, Mazoyer B, Joliot M. Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain. Neuroimage. 2002; 15(1):273-89.

6-04-04 
	-Added a Generate Tables button to allow for the creation of ROI tables.
	-Fixed so doesn't require Image Processing toolbox in order to use dilate function.
	Patched files:
		wfu_pickatlas.m
		wfu_pickatlas.fig
	Added files:
		dilate_cube.m
		findindex.m
		wfu_generate_table.m
		wfu_read_flist.m
10-7-04
	-Fixed filename saving bug
	-Matlab 7 compatibility
	Patched files:
		wfu_pickatlas.m
		wfu_pickatlastype.m

1-7-05
	-Fixed table generation bug
	-Added Nichols' conjunction analysis option, added files:
	       wfu_spm_getSPM2_conj.m
	       wfu_spm_getSPM99_conj.m


		
2-15-05
	-Reverted to previous version of wfu_spm_getSPM*_conj.m due to
	 recalled distribution of SPM2 updates on January 5th 2005.

3-30-05
	-Additional modifications to wfu_spm_getSPM2_conj.m to ensure compatibility with current version of spm_conman.m 

8-02-05
	-SPM5 compatibility
	-generating .mat files for orientation 

10-12-05
	-SPM5 compatiblity for data type

12-28-05
	-SPM5 check for spm_get in path

1-4-06
	-Merged wfu_generate_table.m into wfu_pickatlas.m

1-17-06
	-Added wfu_txt2roi.m, wfu_extract_labels.m
	-Added *BORDER.mat, *List.mat to MNI_atlas_templates dir

2-17-06
	-Modified 'spm_select' arguments in wfu_spm_getSPM5.m

2-22-06
	-Changed template file names from _BORDER.mat to _Border.mat

2-24-06
	-Added fullfile to wfu_atlas_filename in wfu_spm_getSPM5.m

7-24-06
	-Added checks for spm*.img files in case no betas for ROI realignment
	-Modified spm('Ver') checks to seek SPM99, SPM2, or SPM5 in path
	-Added test for 'C' correlation stat in SPM.mat
	-Included TD talairach.jar for PointtoTD

8-1-06
	-For 'C' stat, define threshold in terms of p-value or correlation

8-3-06
	-Added subtract function to Advanced Mode

9-27-06
	-Allow various atlas dimensions
	-The starting value for the homologous correlation field search 
	     is now changed to (approximate) uncorrected threshold

1-9-07
	-Added FAQ
	-Set version number to 2.2
	-Adjusted for SPM5 v665 change of defaults.units
		from scalar to 3-element vector
	-Adjusted for new SPM5 thresDesc variable
	-Set .fig file's full path for argument to openfig 
	     as expected by MATLAB7.3
	-In SPM5, write mask with spm_write_vol

2-13-07
	-Set version number to 2.3
	-No longer write mask with spm_write_vol in SPM5
	-Now calculate FDR p-values properly
	-Renamed WFU_PickAtlas directory to wfu_pickatlas for 
		SPM GUI toolbox compatibility
	-Updated PickAtlas manual for version 2.3

3-2-07
	-Fix the version number as 2.3 in the GUI panel
