DoReferencedICA:        0
InputDirectory:         D:\data-test\realdata\GroupICA\ExampleData
OutputDirectory:        D:\output\output
ReferencedDirectory:    D:\data-test\realdata\GIGICA\Example1\referenceIC
MaskFile:               D:\data-test\realdata\GroupICA\ExampleData\maskFMRI.img
Subject-PCA-PC-Number:  60 
Group-PCA-PC-Number:    30  
PCA-Preprocessing:      Removing-mean-per-time-point
Subject-IC-Computing:   DualRegression
ComponetScaling:        ZSCORE
------------------------------------------------
Usage: GIGICA.exe config.txt

Note:
  1) DoReferencedICA  has to be set to 0 or 1;
      if 0 do Group ICA based computation of subject specific ICs            
         ReferencedDirectory  will not be used and can be set as null;
     if 1 do ICAR            
        Subject-PCA-PC-Number, Group-PCA-PC-Number will not be used and can be set as 0;
        PCA-Preprocessing  will not be used and can be set as null;
        Reference ICs have to be provided.
  2) MaskFile  can be  NULL;
  3) Reference ICs in ReferencedDirectory should be *.img and *.hdr;
  4) PCA-Preprocessing can be  Remove-mean-per-voxel,Variance-normalization
  5) Subject-IC-Computing Can be GICA1,GICA2,GICA3,GIGICA,DualRegression
  6) Data files in InputDirectory should be:
     --Subject1
       --*001.hdr
       --*001.img
       --*002.hdr
       --*002.img
       --*003.hdr
       --*003.img
       ...
     --Subject2
       --*001.hdr
       --*001.img
       --*002.hdr
       --*002.img
       --*003.hdr
       --*003.img
       ...
     --Subject3
       ...
 7) Group IC data is outputed in  OutputDirectory/group;
 8) Subject IC data is outputed in  OutputDirectory/subject;
 9) Subject Time Course data is outputed in  OutputDirectory/TC;
--------------------------------------------
    About Group Informatin Guided ICA
    The Group Information Guided ICA Tool is protected by Copyright, and is freely available.
    Like most software, this tool is provided  without any warranty of any kind or fitness for use, no indemnification is provided. By accepting the license you accept these disclaimers.
    Contactor: gjwen@nlpr.ia.ac.cn, yfan@nlpr.ia.ac.cn,  yhdu@nlpr.ia.ac.cn
