|
Notes:
User manual
You can access the MITK Diffusion online
documentation here
Publication: MITK-DI - A new diffusion
imaging component for MITK. In Deserno TM, Handels H, Meinzer
HP, Tolxdorff T (eds). Bildverarbeitung für die Medizin 2010.
Heidelberg: Springer (2010) 246-250
Authors:
Fritzsche KH1, Meinzer H-P1
Institution:
1German Cancer Research Center
Downloads
Version 2012 ( Release date: 07-05-2012
)
Requirements
Additional system specific requirements:
- Windows
-
If you have problems running the Windows
application, please install the Microsoft Redistributable Packages
for VS 2008:
[url=http://www.microsoft.com/download/en/details.aspx?amp;displaylang=en&id=5582]32
bit[/url] or
[url=http://www.microsoft.com/download/en/details.aspx?amp;displaylang=en&id=2092]64
bit[/url]
- Linux
-
the minimal OS version changed to Ubuntu
11.04 because the compiler version available in 10.04 does not
provide features needed by MITK
-
the Qt framework, version 4.6.2 or later
Tested systems
- Windows 7, Windows Vista
- Ubuntu 11.04 and newer
- OS X 10.6 (Snow Leopard), OS X 10.7 (Lion)
Testing data
A set of data for testing the functionality of
the mitkDiffusion application is available here.
If you have questions about the application or
if you would like to give us feedback, don't hesitate to contact us.
Changes:
Changelog
A list of the major changes from the 2011 to the
2012 release of MITK Diffusion.
|
Connectomics
|
Added global clustering computation
|
|
Added generator for synthetic networks
|
|
Fiber Processing
|
much more information about the selected fiber
bundle is displayed
|
|
extraction of fibers passing through a 3D ROI
(mitkSurface, STL mesh) is possible
|
|
fiber smoothing using spline interpolation
added
|
|
fiber coloring by scalar map added
|
|
Gibbs Tracking
|
tracking results can be saved automatically
|
|
major bug that caused only few fibers to be
reconstructed was fixed
|
|
input of gfa image is not needed anymore
|
|
Stochastic Tracking
|
gui completely refactored
|
|
mitkFiberBundleX
|
mitkFiberBundle is replaced by mitkFiberBundleX
which is essentially a vtkPolyData which results in a much better
performance and easier handling
|
|
fiber bundle are saved as vtkPolyData
|
|
old xml based fiber files can still be loaded
and are automatically converted into the new mitkFiberBundleX
|
|
ODF Details
|
refactored gui
|
|
tensor data is displayed
|
|
normalization of the ODFs is applied
correctly
|
|
Partial volume analysis
|
Export of clustering result as image is now
possible
|
|
Preprocessing
|
the number of gradients of the selected image
can be reduced while preserving an equal distribution of the
gradients (as far as possible)
|
|
the gradient directions can be displayed as
pointset
|
|
Q-Ball Reconstruction
|
removed erroneous numerical reconstruction
method
|
|
Segmentation
|
fast interactive 3D interpolation added
|
|
