[Mrtrix-discussion] tract file specification or export

Kerstin Pannek k.pannek1 at uq.edu.au
Wed Oct 14 15:03:10 PDT 2009


Hi

the -ascii option of track_info does the same thing. If you have tracks 
in ascii format and want to use them in MRtrix, use import_tracks.
You can also export the tracks into a map, for example in nifti format, 
using tracks2prob.

Cheers
Kerstin



David.Raffelt at csiro.au wrote:
> Hi Maarten,
> I have attached some code for a command that may help you out. It will export a mrtrix tck file to a series of ascii files (one per track).
> Just place this file in the cmd directory and rebuild.
> Cheers,
> David
>
>
> ________________________________________
> From: mrtrix-discussion-bounces at www.nitrc.org [mrtrix-discussion-bounces at www.nitrc.org] On Behalf Of Maarten Vaessen [mjvaessen at yahoo.com]
> Sent: Wednesday, 14 October 2009 10:28 AM
> To: mrtrix-discussion at www.nitrc.org
> Subject: [Mrtrix-discussion] tract file specification or export
>
> Hello,
>
> I am looking for a way to export the data from a tractography file (from the streamtrack function) to other applications (preferably MATLAB). Can I find the file type specification somewhere, or is there some kind of export tool available already?
>
> Kind regards,
> Maarten
>   
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