[Mrtrix-discussion] template/fd/IN.mif file in Fibre density and cross-section pipeline

[Ping-Hong Yeh]

Hello Mrtrix3 users,

For calculating FDC values mentioned in the
https://mrtrix.readthedocs.io/en/latest/fixel_based_analysis/mt_fibre_density_cross-section.html,


In Step 18,

foreach * : mrcalc ../template/fd/IN.mif ../template/fc/IN.mif -mult
../template/fdc/IN.mif

Are the ../template/fd/IN.mif  files the same as those
../template/fd/PRE.mif file, which were the output of Step16,

foreach * : fixelcorrespondence IN/fixel_in_template_space/fd.mif
../template/fixel_mask ../template/fd PRE.mif


I was not able to locate the ../template/fd/IN.mif.

Thanks.

Ping
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