MGH CSRL License Yes NITRC JIP fMRI Analysis Toolkit Linux, MacOS Yes C Refer to for web documentation (in progress). The JIP Toolkit was developed primarily for analysis of rodent and non-human primate fMRI data. The toolkit consists of binary executables, highly portable open-source c code, and image resources that enable 1) Automated registration based upon mutual information (affine, non-linear warps), with flexible control and visualization of each step; 2) visualization of 4-dimensional data using either mosaic or tri-planar display of the z/slice dimension, and integration of a general linear model for graphical display of time series analysis; 3) A simple and flexible 1st-order GLM for fMRI time series analysis, a 1st-order GLM analysis for PET data within the SRTM framework, plus a 2nd-order GLM analysis following the Worsley 2002 scheme, and 4) MRI templates to place your rodent and non-human primate data into standardized spaces. 2015-3-26 4 - Beta Darwin (v3.1) 2015-3-26 4 - Beta Linux-i686 (v3.1) 2015-3-26 4 - Beta Linux-x86_64 (v3.1) 2013-1-15 4 - Beta Cygwin executables 2012-12-20 4 - Beta v3.0 2012-12-20 4 - Beta v3.0 2011-1-16 4 - Beta v2.1 2011-1-16 4 - Beta v2.1 2011-1-16 4 - Beta v2.1 2011-1-05 4 - Beta v2.0 2011-1-05 4 - Beta v2.0 2011-1-05 4 - Beta v2.0 2011-1-05 4 - Beta v2.0 2011-1-05 4 - Beta v2.0 JIP fMRI Analysis Toolkit MR, PET/SPECT, X11 Applications, Console (Text Based), End Users, Developers, MGH CSRL License, English, Linux, MacOS, C, Atlas Application, Image-to-Image, Affine Warp, Nonlinear Warp, Resampling, Atlas Data, Time Domain Analysis, Image Display, NIfTI-1, 4 - Beta, Other Format,