GNU GPL v2 Yes NITRC PLINK Yes PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale genetic analyses. PLINK GNU GPL v2, Imaging Genomics, Diabetes Mellitus, Multiple Sclerosis, Crohn Disease, Hypertension, Alzheimer Disease, Attention Deficit Disorder with Hyperactivity, Huntington Disease, Autistic Disorder, Parkinson Disease, Bipolar Disorder, Schizophrenia, Depression, Ataxia, Cocaine-Related Disorders, Dyslexia, Amyotrophic Lateral Sclerosis, Stroke, Lymphoma, Non-Hodgkin, Obsessive-Compulsive Disorder, Anorexia Nervosa, Bulimia, Tobacco Use Disorder, Epilepsy, Hydrocephalus, Tourette Syndrome, Child Development Disorders, Pervasive, Alcohol-Related Disorders, Migraine Disorders, Creutzfeldt-Jakob Syndrome, Muscular Dystrophies, Aphasia, Apraxias, Brain Injuries, Asperger Syndrome, Neurofibromatosis 1, Brain Concussion http://www.nitrc.org/projects/plink/, http://www.nitrc.org/projects/plink/