Attribution Non-Commercial
Yes
Penn State University
NITRC
Awake Rat rsfMRI Database
The database contains resting-state fMRI data from 90 awake rats, obtained in a 7T scanner with a well-established awake imaging paradigm (Nanyin Zhang et al, 2010. J. Neurosci. Methods) that avoids anesthesia interference with rsfMRI data. Both raw and preprocessed data are included, as well as intermediate data from the preprocessing. ICA denoising similar to ICA-FIX was applied. A coregistered Swanson atlas, ROI seedmaps, and group ICA (n=28) are also included.
The database is acquired and maintained by the Translational Neuroimaging and Systems Neuroscience Lab (TNSNL) (https://sites.psu.edu/zhanglab1/) at the Penn State University.
The data is also available at https://psu.box.com/s/fgii5hofdh0fas9tzsze281m5oqqn06d
The updated preprocessing toolkit can be found at https://github.com/liu-yikang/rat_rsfmri_preprocessing
Citation:
Liu, Y., Perez, P. D., Ma, Z., Ma, Z., Dopfel, D., Cramer, S., Tu, W., and Zhang, N. (2020). An open database of resting-state fMRI in awake rats. NeuroImage (in press).
2020-5-24
V1.1
2020-5-19
FC Analysis 1.1
2020-5-19
90Rats 1.1
2019-11-14
FC Analysis 1.0
2019-11-13
90Rats 1.0
2019-11-13
Preprocessing Toolbox 1.0
Awake Rat rsfMRI Database
MR, Attribution Non-Commercial
http://www.nitrc.org/projects/rat_rsfmri/