Waxholm Space Atlas of the Sprague Dawley Rat Brain
The atlas delineations and the MRI/DTI reference data are shared along with labels and configuration files for ITK-SNAP, the Mouse BIRN Atlasing Toolkit, and PMOD. The latest atlas version contains 222 structures. For more information, see MediaWiki.
The atlas has been adopted as the standard rat brain atlas for the EBRAINS infrastructure, see https://ebrains.eu/service/rat-brain-atl...
The atlas is shared under the CC BY-SA 4.0 licence, see Citation for instructions on how to cite.
Specifications
Associations
Recent Activity - Forums
RE: Hippocampus label set posted by Eszter Agnes Papp on Jul 8
Hippocampus label set posted by Niels van Strien on Jul 8
RE: Upload whs-sd-atlas to zenodo in a different format ? posted by Nicolas Chiaruttini on Nov 1, 2021
RE: Upload whs-sd-atlas to zenodo in a different format ? posted by Eszter Agnes Papp on Nov 1, 2021
Upload whs-sd-atlas to zenodo in a different format ? posted by Nicolas Chiaruttini on Nov 1, 2021
Question about diffusion tensor data posted by chanyoung cheong on Jul 18, 2021
RE: Use of Atlas and Labels posted by Eszter Agnes Papp on Jun 23, 2021
Use of Atlas and Labels posted by Luis Javier Hernández on Jun 23, 2021
RE: atlas left and right posted by Eszter Agnes Papp on Jan 15, 2021
atlas left and right posted by Min-Hui Cui on Jan 15, 2021
Recent Activity - Files
WHS_SD_rat_atlas_v4_PMOD.zip posted by Eszter Agnes Papp on Oct 1, 2021
WHS_SD_rat_atlas_v3.01_PMOD.zip posted by Eszter Agnes Papp on Oct 1, 2021
Ready-to-use packages: Bundle release
WHS_SD_rat_atlas_v4_pack.zip posted by Eszter Agnes Papp on Oct 1, 2021
Ready-to-use packages: Bundle release
MBAT_WHS_SD_rat_atlas_v4_pack.zip posted by Eszter Agnes Papp on Oct 1, 2021
MBAT_WHS_SD_rat_atlas_v4.zip posted by Eszter Agnes Papp on Oct 1, 2021
WHS_SD_rat_atlas_v4.label posted by Eszter Agnes Papp on Oct 1, 2021
WHS_SD_rat_atlas_v4.nii.gz posted by Eszter Agnes Papp on Oct 1, 2021
MBAT_WHS_SD_rat_atlas_v3.01.zip posted by Eszter Agnes Papp on Oct 1, 2021
WHS_SD_rat_atlas_v3.01.label posted by Eszter Agnes Papp on Oct 1, 2021
WHS_SD_rat_atlas_v3.01.nii.gz posted by Eszter Agnes Papp on Oct 1, 2021