Date:
2022-03-26 22:57 |
Priority: more information
3 |
Submitted By:
Dianne Patterson (dpat)
|
Assigned To: more information
Nobody (None) |
Hardware:
None | Product:
None |
Operating System:
None | Component:
None |
Version:
None | Severity:
None |
Summary: more information
Atlas labels are not integer type |
| Detailed description |
The label values are close to whole integers, but not quite there.
You can easily set this by using integer as your output type:
e.g.,
fslmaths ArterialAtlas.nii ArterialAtlasInt.nii -odt int
fslmaths ArterialAtlas_level2.nii ArterialAtlas_level2_Int.nii -odt
int
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Response
| Message |
Date: 2022-03-27 18:15
Sender: Dianne Patterson
Thanks for the quick response.
-Dianne
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Date: 2022-03-27 14:58
Sender: CHIN LIU
Hello Dr Dianne,
We saved images by nibabel in python. This might occur due to the
floating precision in different software that you use to open
them. We like to save all the prob map. and other images in
floating point, for future user's convenience.
As for labels images, we can provide images in integers format.
Thanks for providing a approach here.
Best,
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Changes:
| Field |
Old Value |
Date |
By |
| Message | Hello Dr Dianne,
We saved images by nibabel in python. The might occur due to the
floating precision in different software that you use to open
them. We like to save all the prob map. and other images in
floating point, for future user's convenience.
As for labels images, we can provide images in integers format.
Thanks for providing a approach here.
Best, | 2022-03-27 19:45 | hubert_iu |
| New Message | | 2022-03-27 18:15 | dpat |
| New Message | | 2022-03-27 14:58 | hubert_iu | |
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