[#9589] Can I generate json files without accompanying nii files?

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State: more information
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Date:
2020-04-06 07:10
Priority: more information
3
Submitted By:
James Waltz (jawaltz)
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Nobody (None)
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Software A
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Version: 
v1.1
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Summary: more information
Can I generate json files without accompanying nii files?

Detailed description

Hi- I used the first version of dcm2nii to generate nii files without json files.

Now I need the json files.

Is there a way to use dcm2niix to generate json files, without nii files?

Thanks,

Jim Waltz

Response

Message

Date: 2020-04-06 07:22
Sender: Chris Rorden

Run dcm2niix without any parameters to see arguments:
>dcm2niix
Chris Rorden's dcm2niiX version v1.0.20200331 (JP2:OpenJPEG) (JP-LS:CharLS) Clang11.0.0 (64-bit MacOS)
...
-b : BIDS sidecar (y/n/o [o=only: no NIfTI], default y)

Therefore, to create BIDS-format json files without NIfTI images, you would use -b o, so a minimal call would be:
dcm2niix -b o ~/DICOMs

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New Message2020-04-06 07:22crlab