Date: 2014-10-01 23:02 |
Priority: more information 3 |
Submitted By:
Hanbo Chen (cojoc)
|
Assigned To: more information
Nobody (None) |
Product: None | Operating System: None |
Component: None |
Summary: more information Add an adaptive threshold plugin for SWC file |
Detailed description |
SWC file may be huge due to redundancy of points when build.
Currently, there is a resample plugin to reduce the number of point
by down sampling. However, this down sample process based on fixed
steps. This will not be nice when neuron turns in sharp angle as it
will over smooth the structure. It will be better to add a adaptive
threshold method for better visualization.
| |
|
Response
Message |
Date: 2014-10-03 17:21
Sender: Hanbo Chen
Adaptive down sample feature is now updated.
1. The down sample decision is made based on turning angle of
curves. If the curve turn sharply, the point will be kept.
Otherwise deleted.
2. Radius change is an optional criteria when perform down
sampling. If option checked, the point will be kept when radius
changes sharply.
3. An optional re-sample can be performed before down sampling.
This will uniform the length of segments on curves and smooth the
curves a little bit. This will help to remove unexpected short
sharp turning or zigzag that may impact the performance of down
sample.
4. All input parameters required can be set in a simple dialog.
|
Date: 2014-10-02 20:29
Sender: Hanbo Chen
The path problem has been fixed. Relative path is applied.
|
Date: 2014-10-02 20:06
Sender: Hanchuan Peng
need to fix the path to make it general on any platform
work/vaa3d_tools/hackathon/hanbo/resample_swc_adapt/resample_swc.pro:5:
Unescaped backslashes are deprecated.
WARNING: Failure to find: d:v3d_main/basic_c_fun/v3d_message.cpp
WARNING: Failure to find:
d:v3d_main/basic_c_fun/basic_surf_objs.cpp
|
Date: 2014-10-02 18:29
Sender: Hanchuan Peng
It is not thresholding, it is resampling.
| |
|
Attached Files:
Name |
Download | No Files Currently Attached | |
|
Changes:
Field |
Old Value |
Date |
By |
New Message | | 2014-10-03 17:21 | cojoc |
New Message | | 2014-10-02 20:29 | cojoc |
New Message | | 2014-10-02 20:06 | hanchuan |
New Message | | 2014-10-02 18:29 | hanchuan | |
|