[#8109] Colorbars in SurfIce

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Date:
2016-06-09 15:41
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3
Submitted By:
Andreas Horn (andreashorn)
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Colorbars in SurfIce

Detailed description

Dear SurfIce team,

is it possible to show color bars in SurfIce? If not, is this feature planned?
It would help a lot for me..
In case I need to build color bars manually, do you know where I could find e.g. a picture of the actc color map?

Thanks!
Andy

Response

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Date: 2016-06-09 15:54
Sender: Chris Rorden

Here is how to do it
1.) Choose File/Open to select your background image (e.g. BrainMesh_ICBM152_smoothed.mz3)
2.) Choose Overlay/Add to select your statistical map (e.g. motor_4t95vol.nii.gz)
3.) A new toolbox papers named "Overlays" - use the Color pulldown menu to select ACTC, you may also want to adjust the min and max intensities
4.) Choose Color/ColorBar to toggle the colorer on and off.

Note that the ColorBar only appears for overlays and nodes that have variability in their intensity. If you load an isosurface mesh (e.g. motor_4t95mesh.mz3) which has a single value for the boundary there is no color bar and no ability to set a minimum and maximum threshold. 

Here are examples
https://www.nitrc.org/plugins/mwiki/inde...

https://www.youtube.com/watch?v=5wUVcAT-...

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Field Old Value Date By
New Message2016-06-09 15:54crlab