[Repronim-trd3] Containers (overview): OHBM abstract
Yaroslav O Halchenko
yoh at onerussian.com
Tue Dec 18 09:53:54 PST 2018
Hi Everyone,
In the best traditions of a last moment idea, we are starting to
compose an abstract for OHBM which would relate to many of our ongoing
activities since the main theme will be -- Containers.
The overall goal is to provide an overview over existing popular
technologies (docker, Singularity) including their pros/cons, their use
in neuroimaging for establishing unified interfaces (bids-apps, flywheel
gears, boutiques), and related tooling to actually assure reproducible
computation (aspects of creation, execution, retention).
From ReproNim crowd I've already added Matt to the authors list
due to nd_freeze, but welcome everyone to contribute (and add yourself
to the authors).
Satra, Jakub, Dorota - I wonder if you are working on a dedicated
abstract/poster for neurodocker and around. If not, or even if so
-- I welcome you to join/contribute. One of the aspects I would like to
mention is Containers QA/Verification. Or if you feel that such
abstract/poster/paper was largely already "done" by someone -- please
refer me to it so we could just avoid reinventing the wheel ;)
ATM it is quite blank -- just starting to add some meat:
https://docs.google.com/document/d/1sOUGYI9vC4dTSu4x6NJ7o1I6xu9TLN65M1uYEaqtZ74/edit?usp=sharing
Cheers,
--
Yaroslav O. Halchenko
Center for Open Neuroscience http://centerforopenneuroscience.org
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419
WWW: http://www.linkedin.com/in/yarik
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