[Repronim-trd3] Containers (overview): OHBM abstract

[Dorota Jarecka]

Hi Yarik,

I've actually haven't started any abstract yet, but has been just talking
to Satra about it. We're planning to prepare something about Nipype, but
nothing about testing/containers for OHBM (maybe for INCF), so I'm happy to
join if I can contribute.

Thanks!
Dorota


On Tue, Dec 18, 2018 at 12:54 PM Yaroslav O Halchenko <yoh at onerussian.com>
wrote:

> Hi Everyone,
>
> In the best traditions of a last moment idea, we are starting to
> compose an abstract for OHBM which would relate to many of our ongoing
> activities since the main theme will be -- Containers.
>
> The overall goal is to provide an overview over existing popular
> technologies (docker, Singularity) including their pros/cons, their use
> in neuroimaging for establishing unified interfaces (bids-apps, flywheel
> gears, boutiques), and related tooling to actually assure reproducible
> computation (aspects of creation, execution, retention).
>
> From ReproNim crowd I've already added Matt to the authors list
> due to nd_freeze, but welcome everyone to contribute (and add yourself
> to the authors).
>
> Satra, Jakub, Dorota - I wonder if you are working on a dedicated
> abstract/poster for neurodocker and around.  If not, or even if so
> -- I welcome you to join/contribute.  One of the aspects I would like to
> mention is Containers QA/Verification.  Or if you feel that such
> abstract/poster/paper was largely already "done" by someone -- please
> refer me to it so we could just avoid reinventing the wheel ;)
>
> ATM it is quite blank -- just starting to add some meat:
>
> https://docs.google.com/document/d/1sOUGYI9vC4dTSu4x6NJ7o1I6xu9TLN65M1uYEaqtZ74/edit?usp=sharing
>
> Cheers,
> --
> Yaroslav O. Halchenko
> Center for Open Neuroscience     http://centerforopenneuroscience.org
> Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
> Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
> WWW:   http://www.linkedin.com/in/yarik
>
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