[Repronim-trd3] Containers (overview): OHBM abstract

[Satrajit Ghosh]

hi yarik,

i don't completely know where you are headed with this, but you are welcome
to add us if you think our efforts at making neurodocker containers
reproducible is related :)

cheers,

satra

On Wed, Dec 19, 2018 at 7:38 PM Yaroslav Halchenko <yoh at dartmouth.edu>
wrote:

> Jakub, Satra -- you are still welcome to join fun
>
> Dorota -- thanks for the figure, it starts to form!
>
> Could you add GitHub/AWS icons to Storage layer?
>
> Make Storage link go backwards, and add one going up from Images on the
> right
>
> Add nd_freeze to under Creation.
>
> add "niceman run" to under datalad containers-run
>
>
> On Tue, 18 Dec 2018, Dorota Jarecka wrote:
>
> >    Hi Yarik,
> >    I've actually haven't started any abstract yet, but has been just
> talking
> >    to Satra about it. We're planning to prepare something about Nipype,
> but
> >    nothing about testing/containers for OHBM (maybe for INCF), so I'm
> happy
> >    to join if I can contribute.
> >    Thanks!
> >    Dorota
> >    On Tue, Dec 18, 2018 at 12:54 PM Yaroslav O Halchenko <
> yoh at onerussian.com>
> >    wrote:
>
> >      Hi Everyone,
>
> >      In the best traditions of a last moment idea, we are starting to
> >      compose an abstract for OHBM which would relate to many of our
> ongoing
> >      activities since the main theme will be -- Containers.
>
> >      The overall goal is to provide an overview over existing popular
> >      technologies (docker, Singularity) including their pros/cons, their
> use
> >      in neuroimaging for establishing unified interfaces (bids-apps,
> flywheel
> >      gears, boutiques), and related tooling to actually assure
> reproducible
> >      computation (aspects of creation, execution, retention).
>
> >      From ReproNim crowd I've already added Matt to the authors list
> >      due to nd_freeze, but welcome everyone to contribute (and add
> yourself
> >      to the authors).
>
> >      Satra, Jakub, Dorota - I wonder if you are working on a dedicated
> >      abstract/poster for neurodocker and around.  If not, or even if so
> >      -- I welcome you to join/contribute.  One of the aspects I would
> like
> >      to
> >      mention is Containers QA/Verification.  Or if you feel that such
> >      abstract/poster/paper was largely already "done" by someone --
> please
> >      refer me to it so we could just avoid reinventing the wheel ;)
>
> >      ATM it is quite blank -- just starting to add some meat:
> >
> https://docs.google.com/document/d/1sOUGYI9vC4dTSu4x6NJ7o1I6xu9TLN65M1uYEaqtZ74/edit?usp=sharing
>
> >      Cheers,
> --
> Yaroslav O. Halchenko
> Center for Open Neuroscience     http://centerforopenneuroscience.org
> Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
> Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
> WWW:   http://www.linkedin.com/in/yarik
>
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