[Repronim-trd3] Containers (overview): OHBM abstract

[Yaroslav Halchenko]

Jakub, Satra -- you are still welcome to join fun

Dorota -- thanks for the figure, it starts to form!

Could you add GitHub/AWS icons to Storage layer?

Make Storage link go backwards, and add one going up from Images on the right

Add nd_freeze to under Creation.

add "niceman run" to under datalad containers-run


On Tue, 18 Dec 2018, Dorota Jarecka wrote:

>    Hi Yarik,
>    I've actually haven't started any abstract yet, but has been just talking
>    to Satra about it. We're planning to prepare something about Nipype, but
>    nothing about testing/containers for OHBM (maybe for INCF), so I'm happy
>    to join if I can contribute.
>    Thanks!
>    Dorota
>    On Tue, Dec 18, 2018 at 12:54 PM Yaroslav O Halchenko <yoh at onerussian.com>
>    wrote:

>      Hi Everyone,

>      In the best traditions of a last moment idea, we are starting to
>      compose an abstract for OHBM which would relate to many of our ongoing
>      activities since the main theme will be -- Containers.

>      The overall goal is to provide an overview over existing popular
>      technologies (docker, Singularity) including their pros/cons, their use
>      in neuroimaging for establishing unified interfaces (bids-apps, flywheel
>      gears, boutiques), and related tooling to actually assure reproducible
>      computation (aspects of creation, execution, retention).

>      From ReproNim crowd I've already added Matt to the authors list
>      due to nd_freeze, but welcome everyone to contribute (and add yourself
>      to the authors).

>      Satra, Jakub, Dorota - I wonder if you are working on a dedicated
>      abstract/poster for neurodocker and around.  If not, or even if so
>      -- I welcome you to join/contribute.  One of the aspects I would like
>      to
>      mention is Containers QA/Verification.  Or if you feel that such
>      abstract/poster/paper was largely already "done" by someone -- please
>      refer me to it so we could just avoid reinventing the wheel ;)

>      ATM it is quite blank -- just starting to add some meat:
>      https://docs.google.com/document/d/1sOUGYI9vC4dTSu4x6NJ7o1I6xu9TLN65M1uYEaqtZ74/edit?usp=sharing

>      Cheers,
-- 
Yaroslav O. Halchenko
Center for Open Neuroscience     http://centerforopenneuroscience.org
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
WWW:   http://www.linkedin.com/in/yarik