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help > Adding MCALT Atlases to WFU_PickAtlas Toolbox in SPM12
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Apr 3, 2020 06:04 PM | Alexandria Jensen - University of Colorado Denver Anschutz Medical Campus
Adding MCALT Atlases to WFU_PickAtlas Toolbox in SPM12
Hello,
I am attempting to add the atlases from the NITRC MCALT download into the WFU_PickAtlas Toolbox for SPM12. I have followed the developer's manual instructions from the toolbox but, when I try to access the atlases, I get the following error:
Unrecognized function or variable 'Region'.
Error in wfu_get_atlas_list>lookup (line 117)
if ~(isempty(Region))
Error in wfu_get_atlas_list (line 31)
[A] = lookup(atlas_path, T, I, O, N);
Error in wfu_pickatlas>Initialize (line 214)
[Atlas]=wfu_get_atlas_list(handles.data.SelectedAtlasType.subdir, ...
Error in wfu_pickatlas (line 55)
Initialize(fig, [], handles, varargin{:})
Error in spm (line 946)
evalin('base',xTB(i).prog);
Error while evaluating UIControl Callback.
I have tried nearly everything I can think of to fix this error but nothing is working unfortunately. Any assistance would be greatly appreciated!
Alexandria Jensen
I am attempting to add the atlases from the NITRC MCALT download into the WFU_PickAtlas Toolbox for SPM12. I have followed the developer's manual instructions from the toolbox but, when I try to access the atlases, I get the following error:
ans
=
struct with fields:
atlasname: 'MCALT HUMAN ATLAS'
subdir: 'MCALT_atlas_templates'
lookupfile: 'master_lookup.txt'
dispimage: 'MCALT_T1.nii'
licensefile: ''
conversionfile: ''
conversion: []
struct with fields:
atlasname: 'MCALT HUMAN ATLAS'
subdir: 'MCALT_atlas_templates'
lookupfile: 'master_lookup.txt'
dispimage: 'MCALT_T1.nii'
licensefile: ''
conversionfile: ''
conversion: []
Unrecognized function or variable 'Region'.
Error in wfu_get_atlas_list>lookup (line 117)
if ~(isempty(Region))
Error in wfu_get_atlas_list (line 31)
[A] = lookup(atlas_path, T, I, O, N);
Error in wfu_pickatlas>Initialize (line 214)
[Atlas]=wfu_get_atlas_list(handles.data.SelectedAtlasType.subdir, ...
Error in wfu_pickatlas (line 55)
Initialize(fig, [], handles, varargin{:})
Error in spm (line 946)
evalin('base',xTB(i).prog);
Error while evaluating UIControl Callback.
I have tried nearly everything I can think of to fix this error but nothing is working unfortunately. Any assistance would be greatly appreciated!
Alexandria Jensen
Jun 9, 2021 08:06 AM | Myrthe Jansen
RE: Adding MCALT Atlases to WFU_PickAtlas Toolbox in SPM12
Hi, I get exactly the same error message when trying to add the
AAL3 atlas to the pickatlas toolbox in SPM12, did you ever figure
out the problem?
Many thanks in advance for any advice!
Best,
Myrthe
Many thanks in advance for any advice!
Best,
Myrthe