The IIT Human Brain Atlas (v.3)

The IIT Human Brain Atlas (v.3) contains new anatomical, DTI, HARDI templates and probabilistic gray matter labels of the adult human brain in ICBM-152 space. Artifact-free MRI data from 72 human subjects was used in the development of the atlas. All diffusion MRI data collection was conducted using Turboprop, and spatial normalization was accomplished in a population-based fashion. If you use or present components of the atlas, please reference: Varentsova A, Zhang S, Arfanakis K. Development of a High Angular Resolution Diffusion Imaging Human Brain Template. NeuroImage 2014;91:177-186.

- A description of the contents of the atlas can be found in the "Downloads" link.
- Information on HOW TO use the atlas can be found in the "Docs" link.
- Post your questions or experiences with the atlas on the "Forums".

NOTE: The older IIT2 DTI Brain Template is still available. However, we recommend using the new DTI template of the IIT Human Brain Atlas (v.3).
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Specifications

Category:Atlas Data
License:IIT Human Brain Template License
Domain:MR

Associations

works well with:FSL
ITK-SNAP
MRtrix
DTI-TK

Recent Activity

Show: 
Forum Activity

how_to forum

RE: HOW TO use the DTI template for registration posted by Konstantinos Arfanakis on May 28

Forum Activity

how_to forum

RE: HOW TO use the DTI template for registration posted by Marcus heldmann on May 27

Document Activity

Main Folder documentation

Paper on the construction of the HARDI template of the IIT Human Brain Atlas (v.3) posted by Konstantinos Arfanakis on Jan 17

News Activity

Tool & Resource news

HOW TO update  posted by Konstantinos Arfanakis on Jan 6

Forum Activity

how_to forum

RE: HOW TO use the DTI template for registration posted by Konstantinos Arfanakis on Jan 3

Document Activity

Main Folder documentation

HOW TO register DTI data to the IIT Human Brain Atlas (v.3) using DTI-TK  posted by Konstantinos Arfanakis on Jan 3

Forum Activity

how_to forum

RE: HOW TO use the DTI template for registration posted by Sean Hatton on Jan 1

Document Activity

Main Folder documentation

Paper comparing standardized and study-specific DTI templates for the purpose of inter-subject spatial normalization posted by Konstantinos Arfanakis on Nov 21, 2013

Forum Activity

how_to forum

RE: HOW TO do tractography on the HARDI template posted by Konstantinos Arfanakis on Nov 20, 2013

Forum Activity

how_to forum

RE: HOW TO use the atlas in TBSS posted by Konstantinos Arfanakis on Nov 20, 2013