The IIT Human Brain Atlas (v.4.0)

The IIT Human Brain Atlas (v.4.0) contains anatomical, DTI, HARDI templates, probabilistic gray matter labels, probabilistic connectivity-based white matter labels, and major fiber-bundles of the adult human brain in ICBM-152 space. Artifact-free MRI data from 72 human subjects were used in the development of the atlas. All diffusion MRI data collection was conducted using Turboprop, and spatial normalization was accomplished in a population-based fashion. If you use or present components of the atlas, please reference: Varentsova A, Zhang S, Arfanakis K. Development of a High Angular Resolution Diffusion Imaging Human Brain Template. NeuroImage 2014;91:177-186.

- A description of the contents of the atlas can be found in the "Downloads".
- Information on HOW TO use the atlas can be found in the "Docs".
- Post questions or experiences with the atlas on the "Forums".

Version 4.0 was uploaded on 5/15/15.
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Specifications

Category:Atlas Data
License:IIT Human Brain Template License
Domain:MR

Associations

works well with:FSL
ITK-SNAP
MRtrix
DTI-TK

Recent Activity

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News Activity

Tool & Resource news

IIT Human Brain Atlas v.4.0 Released  posted by Konstantinos Arfanakis on May 29

Document Activity

Main Folder documentation

HOW TO use the IIT Human Brain Atlas to find out which pairs of gray matter labels have connections through a user-defined white matter region of interest (ROI) posted by Konstantinos Arfanakis on May 22

File Activity

IIT Human Brain Atlas (v.4.0): HOW-TOs release

HOW-TO-extract-pairs-of-GM-labels-with-connections-through-WM-ROI.pdf posted by Konstantinos Arfanakis on May 22

File Activity

IIT Human Brain Atlas (v.4.0): White matter atlas release

region_stat.m posted by Konstantinos Arfanakis on May 22

File Activity

IIT Human Brain Atlas (v.4.0): White matter atlas release

IIT_WM_atlas_confidence_skeletonized_256.nii.gz posted by Konstantinos Arfanakis on May 22

File Activity

IIT Human Brain Atlas (v.4.0): White matter atlas release

IIT_WM_atlas_confidence_skeletonized.nii.gz posted by Konstantinos Arfanakis on May 22

File Activity

IIT Human Brain Atlas (v.4.0): White matter atlas release

IIT_WM_atlas_confidence.nii.gz posted by Konstantinos Arfanakis on May 22

File Activity

IIT Human Brain Atlas (v.4.0): White matter atlas release

IIT_WM_atlas_skeletonized_256.nii.gz posted by Konstantinos Arfanakis on May 22

File Activity

IIT Human Brain Atlas (v.4.0): White matter atlas release

IIT_WM_atlas_skeletonized.nii.gz posted by Konstantinos Arfanakis on May 22

File Activity

IIT Human Brain Atlas (v.4.0): White matter atlas release

IIT_WM_atlas.nii.gz posted by Konstantinos Arfanakis on May 22