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help > RE: Header error in Conn Preprocessing
Sep 22, 2014 05:09 AM | Alfonso Nieto-Castanon - Boston University
RE: Header error in Conn Preprocessing
Hi Kaylah,
Thanks for reporting this. This was a bug in some of the new functionality which was not handling appropriately folder names that include whitespaces. This has been fixed in the latest version of conn just released (CONN14n). Let me know if you are still running into this or other issues.
Best
Alfonso
Originally posted by Kaylah Curtis:
Thanks for reporting this. This was a bug in some of the new functionality which was not handling appropriately folder names that include whitespaces. This has been fixed in the latest version of conn just released (CONN14n). Let me know if you are still running into this or other issues.
Best
Alfonso
Originally posted by Kaylah Curtis:
Below is the error I got recently in Conn. This
was not happening before in the 70 people I ran earlier from the
same cohort from the ABIDE online database of scans. Please let me
know what to do! Thanks.
ERROR DESCRIPTION:
Error using read_hdr (line 35)
Error reading header file "/Volumes/SalasDrobo2/ABIDE_Study/RS/NYU/Group 2/0050990/session_1/anat_1/cmprage.nii"
Error in nifti (line 27)
vol = read_hdr(fname);
Error in spm_get_space (line 18)
N = nifti(P);
Error in conn_setup_preproc (line 370)
M=spm_get_space(temp);
Error in conn_setup_wizard (line 139)
conn_setup_preproc(OPTIONS.STEPS,'multiplesteps',1,'dogui',OPTIONS.CONN_DISPLAY,'structural_template',OPTIONS.STRUCTURAL_TEMPLATE,'functional_template',OPTIONS.FUNCTIONAL_TEMPLATE,...
Error in conn (line 1694)
conn_setup_wizard;
Error in conn_menumanager (line 102)
feval(CONN_MM.MENU{n0}.callback{n1}{1},CONN_MM.MENU{n0}.callback{n1}{2:end});
CONN v.14.l
SPM8 + Beamforming DEM FieldMap MEEGtools
Matlab v.2013b
ERROR DESCRIPTION:
Error using read_hdr (line 35)
Error reading header file "/Volumes/SalasDrobo2/ABIDE_Study/RS/NYU/Group 2/0050990/session_1/anat_1/cmprage.nii"
Error in nifti (line 27)
vol = read_hdr(fname);
Error in spm_get_space (line 18)
N = nifti(P);
Error in conn_setup_preproc (line 370)
M=spm_get_space(temp);
Error in conn_setup_wizard (line 139)
conn_setup_preproc(OPTIONS.STEPS,'multiplesteps',1,'dogui',OPTIONS.CONN_DISPLAY,'structural_template',OPTIONS.STRUCTURAL_TEMPLATE,'functional_template',OPTIONS.FUNCTIONAL_TEMPLATE,...
Error in conn (line 1694)
conn_setup_wizard;
Error in conn_menumanager (line 102)
feval(CONN_MM.MENU{n0}.callback{n1}{1},CONN_MM.MENU{n0}.callback{n1}{2:end});
CONN v.14.l
SPM8 + Beamforming DEM FieldMap MEEGtools
Matlab v.2013b
Threaded View
| Title | Author | Date |
|---|---|---|
| Kaylah Curtis | Sep 18, 2014 | |
| Christian Weisstanner | Nov 23, 2014 | |
| Fred Uquillas | Feb 17, 2015 | |
| Alfonso Nieto-Castanon | Sep 22, 2014 | |