Hi Beatriz,

Thanks for your quick reponses and I'm glad that I can help a little bit to polish the release.

I did the following:
#remove previous version of SPHARM-PDM v1.11
#remove all results from the output folder
#download and unzip SPHARM-PDM v1.11
#restart computer
#Set the environnement variable BatchmakeShapeAnalysisModule_Dir and add the external applications.
export BatchmakeShapeAnalysisModule_Dir=/home/elwannabe/Documenten/HJ/TEST1/SPHARM1_11_precompiled/spharm-pdm_linux64/BatchMake_Applications
export PATH=/home/elwannabe/Documenten/HJ/TEST1/SPHARM1_11_precompiled/spharm-pdm_linux64/:${PATH}

#open Slicer v3.6
#view --> Application Settings --> Module Settings --> add a present --> /home/elwannabe/Documenten/HJ/TEST1/SPHARM1_11_precompiled/spharm-pdm_linux64/
#close slicer

#Run analysis with tutorial data from http://www.nitrc.org/docman/index.php?gr...

#run SPHARM-PDM using gui of Slicer3
Under 'Shape Analysis module' only Mancova Shape Analysis Tool, Particle module and SegPostProcess where showed. In addition ShapeAnalysisMANCOVA_wizard were showed under Statistics. No ShapeAnalysisModule was showed. (same result as yesterday)

#using slicer v4.1.1 --> same result

#run SPHARM-PDM from commandline
ShapeAnalysisModule --sx 0.5 --sy 0.5 --sz 0.5 --label 1 --NumberofIterations 100 --SubdivLevelValue 10 --SPHARMDegreeValue 15 --columVolumeFile 0 --varX 10 --varY 10 --varZ 10 --regTemplate None --flipTemplate None --paraOutTemplate --noFlip --HorizontalGridPara 1 --VerticalGridPara 2 --DoParticlesCorrespondence --UseProcalign /home/elwannabe/Documenten/HJ/TEST1/Data/Input/InputFile_ShapeAnalaysis_4data.csv /home/elwannabe/Documenten/HJ/TEST1/Data/Output

#Completed with errors (see attachment)

Thanks,

Henk-Jan