News for Spinal Cord Toolbox
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Showing 1-31 of 31
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| Post Date | Headline |
| Jan 22, 2019 |
New release: v4.0.0-beta.0 Dear SCT users, We are happy to announce a new SCT release! https://github.com/neuropoly/spinalcordt... [1] This is a beta version for now,... |
| Nov 2, 2018 |
New release: v3.2.7 Dear SCT users, We are happy to announce a new SCT release! https://github.com/neuropoly/spinalcordt... [1] Changes to release: https://github.com/neuropoly/spinalcordt... |
| Oct 17, 2018 |
signal to noise ratio Hi JB,sct_compute_snr can be used to compute SNR. Various methods are available (diff, mult). You can also compute SNR per vertebral levels using the flag -vert.Cheers,Julien |
| Oct 16, 2018 |
signal to noise ratio Dear Dr Jullian,.I would like to inqire about signalto noise ratio at each vertebral level. Is there any wany in the toolbox to measure SNR?ThanksJB |
| May 4, 2018 |
Labeling for the intervertebral levels Hi John,very sorry about the late response, but this forum is not used for help. Instead, please post your questions there: https://sourceforge.net/p/spinalcordtool...Yes,... |
| Apr 2, 2018 |
Labeling for the intervertebral levels Dear experts,I would like to do labeling for the intervertebral levels like attached. Currently I am doing this manually. Is there any way to do this automatically in the spine toole... |
| Mar 21, 2018 |
Change /temp path Sorry for the simpilicit of the question. I setup envronment insteadsetenv TMPDIR new pathThank you very much |
| Mar 21, 2018 |
Change /temp path Dear SCT experts,My question could be basics but I hipght aporciate your help. All the comamnds in SCT are writing temporary files to /tmp. How can I change that? In other words how... |
| Feb 26, 2018 |
New release: v3.1.1 Dear SCT users, We are happy to announce a new release of the Spinal Cord Toolbox! The new 3.1.1 release can be downloaded here: https://github.com/neuropoly/spinalcordt... |
| Feb 20, 2018 |
SCT course Hi, Did this course already happened this year?Best regards,Carolina Machado |
| Feb 13, 2018 |
sct_propseg logs Hi,I am running sct_propseg and I would like to know why the segmentation stops growing, which stop condition has been met. I could not find any log files and I tried -v 1 to get more... |
| Jan 3, 2018 |
creating inverse warping field for dmri Hi SCT Team,I'm running to an issue trying to create inverse warping field for dmri data. I want to register all my subjects' dmri data to template to run between group analysis. I... |
| Dec 27, 2017 |
SCT course Hi, We organize courses on SCT, each year, after the ISMRM conference. If you'd like to be added to the mailing list, please send an email to spinalcordtoolbox@gmail.com. N.B.:... |
| Nov 2, 2017 |
New release: 3.1 Dear SCT users, The new 3.1 release is out and can be downloaded here: https://github.com/neuropoly/spinalcordt... [1] Changes to release: https://github.com/neuropoly/spinalcordt... |
| Jun 16, 2017 |
(no subject) [DESCRIPTION UNAVAILABLE] |
| Jun 16, 2017 |
SCT's birthday: 3 years old :-) First public release: June 14th 2014 https://github.com/neuropoly/spinalcordt... [1] Links: ------ [1] https://github.com/neuropoly/spinalcordt... |
| Mar 16, 2017 |
New SCT release: 3.0.0 Dear SCT users, The new 3.0.0 release is out and can be downloaded here: https://github.com/neuropoly/spinalcordt... [1] Changes to release are listed here: https://github.com/neuropoly/spinalcordt... |
| Mar 15, 2017 |
New release: 3.0.0 Dear SCT users,The new 3.0.0 release is out and can be downloaded here:https://github.com/neuropoly/spinalcordt...Changes to release are listed here:https://github.com/neuropoly/spinalcordt...Installation... |
| Aug 26, 2016 |
sct_segment_graymatter error Hi all,I am trying to refine the registration to the spinal cord template using gray matter information, but I can't get the gray matter segmentation to work.When I run the command... |
| Aug 6, 2016 |
registration of DTI to T1 or T2 Hi,I want to ask, does SCT (spinal cord tool box) prefer to register dti to the anatomical scan or the other way around? |
| Feb 3, 2016 |
Error when using sct_label_vertebrae: "The file tmp.curve2straight_rigid.txt does not exist. Exit program." Trying to track down the problem. sct_label_vertebrae references sct_straighten_spinalcord, which references sct_concat_transfo, which is approximately where the error was generated... |
| Jan 23, 2016 |
New release: 2.2 Hi,We are happy to announce a new SCT release: v2.2It can be downloaded here:https://sourceforge.net/projects/spinalc...Changes are listed here:https://github.com/neuropoly/spinalcordt...Enjoy... |
| Dec 2, 2015 |
New release: v2.1 Hi,We are happy to announce a new SCT release: v2.1It can be downloaded here:https://sourceforge.net/projects/spinalc...Major changes are listed here:https://github.com/neuropoly/spinalcordt...Enjoy... |
| Nov 1, 2015 |
Job: Neuroimaging software engineer for open-source development in Montreal At the Neuroimaging Research Laboratory (www.neuro.polymtl.ca) based at Ecole Polytechnique, Université de Montréal, we work to better understand the brain and the spinal cord using... |
| Aug 24, 2015 |
Problem with pillow in sct_check_dependences Hi all,So I had errors when running a scan through the DTI steps, and when I ran sct_check_dependences this error came up. Check which OS is running... linux (Linux-3.16.0-44-generic-x86_64-with-Ubuntu-14.10-utopic)Check... |
| Jun 9, 2015 |
Spinal Cord MRI Workshop @ISMRM'15 in Toronto The presentation of the SCToolbox hands-on workshop can be downloaded here. |
| Jun 6, 2015 |
New patch: v2.0.4 Download patch:http://sourceforge.net/projects/spinalco...Release notes:https://github.com/neuropoly/spinalcordt... |
| May 19, 2015 |
New patch: v2.0.3 http://sourceforge.net/projects/spinalco... |
| Apr 21, 2015 |
New Release: v2.0 We are pleased to announce the release v2.0 of the Spinal Cord Toolbox. Several exciting changes are featured, including: - New method to extract metrics that accounts for partial... |
| Apr 17, 2015 |
New release: v2.0 Get the files here:https://sourceforge.net/projects/spinalc...See major changes here:https://github.com/neuropoly/spinalcordt...Enjoy... |
| Jul 2, 2014 |
Spinal Cord Toolbox: First release! We are pleased to announce the first release of the Spinal Cord Toolbox (v1.0). The Spinal Cord Toolbox is a comprehensive and open-source library of analysis tools for multi-parametric... |
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