PESTICA fMRI Physio Detection/Correction

Do you have 3D+time EPI data (BOLD or perfusion) but no usable physio signals for pulse and respiration? Are you concerned about the effect of physio noise on your data but don't know what to do but regress data-derived signals that mix unknown functional signal with possible physio noise signal? This is for you. This distribution includes a tool (Physiologic EStimation by Temporal ICA or PESTICA) to detect physiologic signals _from the data itself_! These signals are equivalent to a parallel monitored pulse signal and a respiratory chest-bellows signal.
Are you concerned about the number of regressors you're incorporating once you add 5th order RETROICOR (20 more regressors!)? The other half of PESTICA is an adaptive physiologic noise removal tool (Impulse Response Function or IRF-RETROICOR) that zooms in on noise with only 6 regressors, getting all the noise that 5th order RETROICOR gets. These tools will allow you to correct your data for physiologic noise with what you currently have.
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Specifications

Category:Physiological Recording, Algorithm or Reusable Library, Independent Component Analysis, Multivariate Analysis, Workflow
License:Attribution Non-Commercial
Development Status:4 - Beta
Domain:MR
Environment:Console (Text Based)
Intended Audience:End Users
Natural Language:English
Operating System:MacOS, Linux
Programming Language:MATLAB, sh/bash
Supported Data Format:ANALYZE

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RE: Slice Timing Correction Info posted by Rocco Marchitelli on Dec 19, 2013

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RE: Slice Timing Correction Info posted by Rocco Marchitelli on Dec 19, 2013

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RE: Slice Timing Correction Info posted by Rocco Marchitelli on Dec 19, 2013

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RE: afni_matlab problem posted by Hang Joon Jo on Oct 15, 2013

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RE: Slice Timing Correction Info posted by Erik Beall on Oct 8, 2013

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RE: Slice Timing Correction Info posted by Rocco Marchitelli on Oct 7, 2013

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RE: coregistration to MNI-template posted by Erik Beall on Oct 1, 2013

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coregistration to MNI-template posted by Rocco Marchitelli on Sep 30, 2013

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RE: Slice Timing Correction Info posted by Erik Beall on Sep 11, 2013

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RE: Slice Timing Correction Info posted by Angela Abbott on Sep 5, 2013