GTRACT

NOTE: All new development is being managed in a github repository. Please visit

https://github.com/BRAINSia/BRAINSStandAlone

GTRACT is a Diffusion Tensor fiber tracking suite that includes streamline tracking tools. The fiber tracking includes a guided tracking tool that integrates apriori information into a streamlines algorithm. This suite of programs is built using the NA-MIC toolkit and uses the Slicer3 execution model framework to define the command line arguments. These tools can be fully integrated with Slicer3 using the module discovery capabilities of Slicer3.
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Specifications

Category:Tensor Metric, Morphology, Tractography
License:BSD License
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Where to get GTRACT v4? posted by Chris Wyatt on Jan 10
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Merge gtractResampleB0 with BRAINSResample posted by Hans Johnson on Apr 20, 2011
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Review code for reading/writing of transforms posted by Hans Johnson on Jun 24, 2010
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Replace with ITK version with similar functionality: itkTransformToDeformationFieldSource.txx posted by kent williams on May 25, 2010
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Replace with ITK version with similar functionality: itkTransformToDeformationFieldSource.txx posted by Hans Johnson on Mar 29, 2010
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GTRACT produces empty FA, ADC, AD, and RD images posted by Hans Johnson on Mar 29, 2010
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BSpline transforms need to set SetGridDirection posted by Vincent Magnotta on Jan 26, 2010
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conversion error C2664: itk::Image<PixelType,3> * to itk::Image<itk::VariableLengthVector<PixelType>,3> * posted by Vincent Magnotta on Jan 26, 2010
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conversion error C2664: itk::Image<PixelType,3> * to itk::Image<itk::VariableLengthVector<PixelType>,3> * posted by Binjie Qin on Jan 26, 2010
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GTRACT produces empty FA, ADC, AD, and RD images posted by Kelsey Vitense on Jan 15, 2010
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Reviews & Ratings

User Reviews (2)

OVERALL:4 out of 5
INSTALLATION:4.5 out of 5
DOCUMENTATION:3 out of 5

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Registered: Nov 29, 2007

This work was supported by:
NIH/NINDS R01-NS050568 (BRAINS Morphology and Image Analysis / Magnotta (PI))
NIH U54 EB005149 (National Alliance for Medical Image Computing)

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