PubMed Mentions
The links below are to publications on PubMed referring to Mouse Connectome Project (MCP). This list is gathered weekly from PubMed automatically and was last updated on February 14, 2026.
| Publication/References | |
| CoCoMac 2.0 and the future of tract-tracing databases. Description: Bakker, Rembrandt, et al. CoCoMac 2.0 and the future of tract-tracing databases. ''Front Neuroinform''. 2012; '''6''': 30 | |
| Combining collation and annotation efforts toward completion of the rat and mouse connectomes in BAMS. Description: Bota, Mihail, et al. Combining collation and annotation efforts toward completion of the rat and mouse connectomes in BAMS. ''Front Neuroinform''. 2012; '''6''': 2 | |
| Comprehensive connectivity of the mouse main olfactory bulb: analysis and online digital atlas. Description: Hintiryan, Houri, et al. Comprehensive connectivity of the mouse main olfactory bulb: analysis and online digital atlas. ''Front Neuroanat''. 2012; '''6''': 30 | |
| The Claustrum and Insula in Microcebus murinus: A High Resolution Diffusion Imaging Study. Description: Park, Soyoung, et al. The Claustrum and Insula in Microcebus murinus: A High Resolution Diffusion Imaging Study. ''Front Neuroanat''. 2012; '''6''': 21 | |
| Alterations in prefrontal-limbic functional activation and connectivity in chronic stress-induced visceral hyperalgesia. Description: Wang, Zhuo, et al. Alterations in prefrontal-limbic functional activation and connectivity in chronic stress-induced visceral hyperalgesia. ''PLoS One''. 2013; '''8''' (3):e59138 | |
| Brain-wide map of efferent projections from rat barrel cortex. Description: Zakiewicz, Izabela M, et al. Brain-wide map of efferent projections from rat barrel cortex. ''Front Neuroinform''. 2014; '''8''': 5 | |
| Functional connectivity-based parcellation and connectome of cortical midline structures in the mouse: a perfusion autoradiography study. Description: Holschneider, Daniel P, et al. Functional connectivity-based parcellation and connectome of cortical midline structures in the mouse: a perfusion autoradiography study. ''Front Neuroinform''. 2014; '''8''': 61 | |
| Visual cortical areas of the mouse: comparison of parcellation and network structure with primates. Description: Laramee, Marie-Eve, et al. Visual cortical areas of the mouse: comparison of parcellation and network structure with primates. ''Front Neural Circuits''. 2014; '''8''': 149 | |
| Neural networks of the mouse neocortex. Description: Zingg, Brian, et al. Neural networks of the mouse neocortex. ''Cell''. 2014 Feb 27; '''156''' (5):1096-111 | |
| The circuit architecture of whole brains at the mesoscopic scale. Description: Mitra, Partha P. The circuit architecture of whole brains at the mesoscopic scale. ''Neuron''. 2014 Sep 17; '''83''' (6):1273-83 | |
| BAMS2 workspace: a comprehensive and versatile neuroinformatic platform for collating and processing neuroanatomical connections. Description: Bota, Mihail, et al. BAMS2 workspace: a comprehensive and versatile neuroinformatic platform for collating and processing neuroanatomical connections. ''J Comp Neurol''. 2014 Oct 1; '''522''' (14):3160-76 | |
| From a meso- to micro-scale connectome: array tomography and mGRASP. Description: Rah, Jong-Cheol, et al. From a meso- to micro-scale connectome: array tomography and mGRASP. ''Front Neuroanat''. 2015; '''9''': 78 | |
| In Vivo Mapping of Cortical Columnar Networks in the Monkey with Focal Electrical and Optical Stimulation. Description: Roe, Anna Wang, et al. In Vivo Mapping of Cortical Columnar Networks in the Monkey with Focal Electrical and Optical Stimulation. ''Front Neuroanat''. 2015; '''9''': 135 | |
| Exploration and visualization of connectivity in the adult mouse brain. Description: Feng, David, et al. Exploration and visualization of connectivity in the adult mouse brain. ''Methods''. 2015 Feb; '''73''': 90-7 | |
| Auditory cortex controls sound-driven innate defense behaviour through corticofugal projections to inferior colliculus. Description: Xiong, Xiaorui R, et al. Auditory cortex controls sound-driven innate defense behaviour through corticofugal projections to inferior colliculus. ''Nat Commun''. 2015 Jun 11; '''6''': 7224 | |
| Connectomic Analysis of Brain Networks: Novel Techniques and Future Directions. Description: Cazemier, J Leonie, et al. Connectomic Analysis of Brain Networks: Novel Techniques and Future Directions. ''Front Neuroanat''. 2016; '''10''': 110 | |
| The mouse cortico-striatal projectome. Description: Hintiryan, Houri, et al. The mouse cortico-striatal projectome. ''Nat Neurosci''. 2016 Aug; '''19''' (8):1100-14 | |
| Towards a comprehensive atlas of cortical connections in a primate brain: Mapping tracer injection studies of the common marmoset into a reference digital template. Description: Majka, Piotr, et al. Towards a comprehensive atlas of cortical connections in a primate brain: Mapping tracer injection studies of the common marmoset into a reference digital template. ''J Comp Neurol''. 2016 Aug 1; '''524''' (11):2161-81 | |
| Reconstruction of Intratelencephalic Neurons in the Mouse Secondary Motor Cortex Reveals the Diverse Projection Patterns of Single Neurons. Description: Lin, Hui-Min, et al. Reconstruction of Intratelencephalic Neurons in the Mouse Secondary Motor Cortex Reveals the Diverse Projection Patterns of Single Neurons. ''Front Neuroanat''. 2018; '''12''': 86 | |
| Long distance projections of cortical pyramidal neurons. Description: Gerfen, Charles R, et al. Long distance projections of cortical pyramidal neurons. ''J Neurosci Res''. 2018 Sep; '''96''' (9):1467-1475 | |
| Integration of gene expression and brain-wide connectivity reveals the multiscale organization of mouse hippocampal networks. Description: Bienkowski, Michael S, et al. Integration of gene expression and brain-wide connectivity reveals the multiscale organization of mouse hippocampal networks. ''Nat Neurosci''. 2018 Nov; '''21''' (11):1628-1643 | |
| A high-throughput neurohistological pipeline for brain-wide mesoscale connectivity mapping of the common marmoset. Description: Lin, Meng Kuan, et al. A high-throughput neurohistological pipeline for brain-wide mesoscale connectivity mapping of the common marmoset. ''Elife''. 2019 Feb 5; '''8''': | |
| Precise segmentation of densely interweaving neuron clusters using G-Cut. Description: Li, Rui, et al. Precise segmentation of densely interweaving neuron clusters using G-Cut. ''Nat Commun''. 2019 Apr 4; '''10''' (1):1549 | |
| In silico exploration of mouse brain dynamics by focal stimulation reflects the organization of functional networks and sensory processing. Description: Spiegler, Andreas, et al. In silico exploration of mouse brain dynamics by focal stimulation reflects the organization of functional networks and sensory processing. ''Netw Neurosci''. 2020; '''4''' (3):807-851 | |
| Organization of the inputs and outputs of the mouse superior colliculus. Description: Benavidez, Nora L, et al. Organization of the inputs and outputs of the mouse superior colliculus. ''Nat Commun''. 2021 Jun 28; '''12''' (1):4004 | |
| Cellular anatomy of the mouse primary motor cortex. Description: Munoz-Castaneda, Rodrigo, et al. Cellular anatomy of the mouse primary motor cortex. ''Nature''. 2021 Oct; '''598''' (7879):159-166 | |
| Molecular and spatial profiling of the paraventricular nucleus of the thalamus. Description: Gao, Claire, et al. Molecular and spatial profiling of the paraventricular nucleus of the thalamus. ''Elife''. 2023 Mar 3; '''12''': | |
| A guide to the BRAIN Initiative Cell Census Network data ecosystem. Description: Hawrylycz, Michael, et al. A guide to the BRAIN Initiative Cell Census Network data ecosystem. ''PLoS Biol''. 2023 Jun; '''21''' (6):e3002133 |