Hi Alfonso and CONN users,

I have actually completed my connectivity analysis but I am having some concerns about the way I have entered the conditions in CONN. I followed the following thread for reference, http://www.nitrc.org/forum/message.php?m... but I still would like to cross check if what I am doing is correct.

So,I have 2 conditions - rest and naming and three runs i.e. N1,N2,N3. I am interested in finding out the connectivity difference in these three runs.If i directly import from the SPM.mat files then what I get are two conditions- naming and rest and I am not able to find the between runs differences.

Thus, after reading the above thread I made three conditions and three sessions. Condition 1 corresponded to session 1 and the session 2 & session 3 onset/duration were left blank as mentioned. Condition 2 corresponded to session 2 and the other sessions were left blank and the condition 3 corresponded to session 3.

Also, since i was only interested in the between condition connectivity i removed the rest condition all together. So I have three conditions only i.e. N1,N2,N3. 
Is what I am doing is correct or am I going wrong at any step.

Thanks in advance,
Shikha