CONN : functional connectivity toolbox

CONN is a Matlab-based cross-platform software for the computation, display, and analysis of functional connectivity in fMRI (fcMRI).

Connectivity measures include Seed-to-Voxel connectivity maps, ROI-to-ROI connectivity matrices, graph properties of connectivity networks, and Voxel-to-Voxel measures (intrinsic connectivity, local correlation maps, and others).

CONN is available for resting state data (rsfMRI) as well as task-related designs. It covers the entire pipeline from raw fMRI data to hypothesis testing.

Highlights:
Control of physiological/movement effects (CompCor)
Artifact detection&scrubbing (ART)
Weighted correlation & PPI models for task-related designs
Dynamic connectivity analyses
FWE-control of connectivity matrices (NBS)
Connectome-wide analyses (MVPA)
Surface- and Volume-based analyses
Repeated measures and mixed within- between-subjects designs
Gui and automated batch options

http://web.mit.edu/swg/software.htm
SPM8/SPM12 compatible
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Specifications

Category:Connectivity Analysis, Modeling, Multivariate Analysis, Principal Component Analysis, Regression, Correlation, Visualization
License:MIT/X Consortium License
Development Status:4 - Beta
Domain:MR
Intended Audience:Developers, End Users
Natural Language:English
Operating System:OS Independent
Programming Language:MATLAB
Supported Data Format:ANALYZE, NIfTI-1

Recent Activity

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Repeated measures data/design in CONN? posted by Jeff Browndyke 1 hour ago

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RE: combining ROIs and one side doesn't pass FDR posted by Mary Newsome on Sep 18

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Header error in Conn Preprocessing posted by Kaylah Curtis on Sep 18

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Basic yet tricky question posted by MaciĆ  Buades-Rotger on Sep 18

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combining ROIs and one side doesn't pass FDR posted by Mary Newsome on Sep 17

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RE: Question about fast event-related design posted by Taylor Salo on Sep 17

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Error in Dynamic FC posted by Kai Zhang on Sep 17

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RE: Questions about ANOVA models posted by Alfonso Nieto-Castanon on Sep 16

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RE: First-level analysis baseline removal posted by Alfonso Nieto-Castanon on Sep 16

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RE: Error in Segmentation  posted by Alfonso Nieto-Castanon on Sep 16