CONN : functional connectivity toolbox

Toolbox for functional connectivity analyses of fMRI data







* Seed-to-voxel analyses: Analyze the connectivity between one or multiple seed areas and the whole brain

* ROI-to-ROI analyses: Analyze the connectivity between multiple ROIs, as well as graph-theoretical properties of the resulting networks

* Voxel-to-voxel analyses: Analyze the whole-brain connectome without using a priori seeds/ROIs

Available for resting state data as well as task-related designs. Gui and automated batch processing

Method highlights:
Complete spatial preprocessing pipeline
CompCor method for removing physiological and movement confounds
Multiple seed-to-voxel and ROI-to-ROI connectivity measures
Network Based Statistics for FWE-control of connectivity matrices
Multivariate pattern analyses of seed-to-voxel connectivity maps
Repeated measures and mixed within- between-subjects designs

Dependencies: Matlab, SPM

http://web.mit.edu/swg/software.htm
http://www.alfnie.com/software/conn/references
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Specifications

Category:Connectivity Analysis, Modeling, Multivariate Analysis, Principal Component Analysis, Regression, Correlation, Visualization
License:MIT/X Consortium License
Development Status:4 - Beta
Domain:MR
Intended Audience:Developers, End Users
Natural Language:English
Operating System:OS Independent
Programming Language:MATLAB
Supported Data Format:ANALYZE, NIfTI-1

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RE: Recurring error when Importing ROI data  posted by Alfonso Nieto-Castanon 22 hours ago

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RE: error in setup for defining sessions posted by Alfonso Nieto-Castanon 22 hours ago

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RE: How to use "age" as covariates? posted by Alfonso Nieto-Castanon 22 hours ago

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RE: Analysis units - raw or PSC? posted by Alfonso Nieto-Castanon 23 hours ago

File Activity

conn: conn v.14.a release

conn14a.zip posted by Alfonso Nieto-Castanon 23 hours ago

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Analysis units - raw or PSC? posted by Marta Vidorreta on Apr 18

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How to use "age" as covariates? posted by Yifei Zhang on Apr 17

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error in setup for defining sessions posted by Pauline Favre on Apr 17

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Recurring error when Importing ROI data  posted by Harriet Johnston on Apr 16

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corr values for individual space subject posted by Giannina Rita Iannotti on Apr 15