FreeSurfer

FreeSurfer is a set of automated tools for reconstruction of the brain’s cortical surface from structural MRI data, and overlay of functional MRI data onto the reconstructed surface.

Specifications

Category:Image Reconstruction, Anatomic, Spatial Transformation, Gaussian Curvature, Mean Curvature, Thickness, Image Display, Surface Rendering
License:FreeSurfer License
Development Status:5 - Production/Stable
Diagnosis:Alzheimer Disease, Schizophrenia
Domain:MR
Environment:Console (Text Based), X11 Applications
Intended Audience:End Users
Natural Language:English
Operating System:MacOS, Linux
Supported Data Format:MGH/MGZ

Recent Activity

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Document Activity

Technical Publications documentation

Automated probabilistic reconstruction of white-matter pathways in health and disease using an atlas of the underlying anatomy. posted by David Kennedy on Feb 26

Document Activity

Technical Publications documentation

Statistical analysis of longitudinal neuroimage data with Linear Mixed Effects models. posted by David Kennedy on Feb 26

Document Activity

Technical Publications documentation

Spatiotemporal linear mixed effects modeling for the mass-univariate analysis of longitudinal neuroimage data. posted by David Kennedy on Feb 26

Document Activity

Technical Publications documentation

Atlas renormalization for improved brain MR image segmentation across scanner platforms. posted by David Kennedy on Feb 26

Document Activity

Technical Publications documentation

Highly accurate inverse consistent registration: a robust approach. posted by David Kennedy on Feb 26

Document Activity

Technical Publications documentation

Avoiding asymmetry-induced bias in longitudinal image processing. posted by David Kennedy on Feb 26

Document Activity

Technical Publications documentation

Effects of registration regularization and atlas sharpness on segmentation accuracy. posted by David Kennedy on Feb 26

Document Activity

Technical Publications documentation

Automatic parcellation of human cortical gyri and sulci using standard anatomical nomenclature. posted by David Kennedy on Feb 26

Document Activity

Technical Publications documentation

Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain. posted by David Kennedy on Feb 26

Document Activity

Technical Publications documentation

Sequence-independent segmentation of magnetic resonance images. posted by David Kennedy on Feb 26