JIST: Java Image Science Toolkit

Java Image Science Toolkit (JIST) provides a native Java-based imaging processing environment similar to the ITK/VTK paradigm. Initially developed as an extension to MIPAV (CIT, NIH, Bethesda, MD), the JIST processing infrastructure provides automated GUI generation for application plug-ins, graphical layout tools, and command line interfaces.

This repository maintains the current multi-institutional JIST development tree and is recommended for public use and extension. To participate in this consortium or seek assistance in integrating JIST modules in your application, please contact us at jist-admin@www.nitrc.org.

JIST was originally developed at IACL and MedIC (Johns Hopkins University) and is now also supported by MASI (Vanderbilt University).

Please use the download nightly build link below to retrieve a currently supported version of JIST. The previous versions are available for archival access.
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Specifications

Category:Experimental Control, Modeling, Quantification, Segmentation, Shape Analysis, Spatial Transformation, Workflow
License:GNU Lesser General Public License (LGPL)
Development Status:4 - Beta
Domain:MR
Environment:Console (Text Based), Other Environment, Win32 (MS Windows), X11 Applications
Intended Audience:Developers, End Users
Natural Language:English
Operating System:MacOS, Windows, OS Independent, BSD, Linux, SunOS/Solaris
Programming Language:Java
Supported Data Format:AFNI BRIK, ANALYZE, COR, DICOM, GIfTI, MGH/MGZ, MINC, MINC2, NIfTI-1, Nrrd, Other Format, Philips PAR/REC

Recent Activity

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XML & <> escape ' test posted by Stephen Damon on Oct 21

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debugging level does not seem to work posted by Stephen Damon on Oct 21

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External volumes not working at all posted by Andrew Plassard on Oct 13

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from closed tracker posted by Bennett Landman on Oct 10

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Bugs tracker

debugging level does not seem to work posted by Andrew Plassard on Oct 9

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Cannot externalize paramvolumecollection posted by Andrew Plassard on Oct 9

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CLI module discovery breaks on "MipavPluginParser" posted by Andrew Plassard on Oct 9

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Bugs tracker

XML & <> escape ' test posted by Andrew Plassard on Oct 9

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Bugs tracker

Each "directory" entry requires "channel" according to Slicer execution model posted by Andrew Plassard on Oct 9

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Bugs tracker

Some plugins fail to run due to a PARSE error posted by Andrew Plassard on Oct 9