dke-questions
dke-questions > RE: ODF Visualization in DSI Studio
Nov 29, 2015 01:11 PM | Russell Glenn - Medical University of South Carolina
RE: ODF Visualization in DSI Studio
Hi Ehsan,
I agree with Frank that the ODF's are 'corrupt,' though I'm not sure why they are rendering like they are, which is a DSI Studio question, as min-max normalization should scale these back to normal... From the DKI side, I believe this is occurring when the diffusion tenser is inverted in very noisy voxels with weird eigenvalues. Both of these rendering problems seem to be happening in the periphery, perhaps even skull where the diffusion signal may not be optimized. I believe we need to implement some regularization procedure, perhaps just on the minimum and maximum allowable eigenvalues to correct this. This could be performed just on DT. I will look into this and see if I can come up with a quick fix for this. Future versions of the software should also be able to overcome this rendering error.
Best,
Russell
I agree with Frank that the ODF's are 'corrupt,' though I'm not sure why they are rendering like they are, which is a DSI Studio question, as min-max normalization should scale these back to normal... From the DKI side, I believe this is occurring when the diffusion tenser is inverted in very noisy voxels with weird eigenvalues. Both of these rendering problems seem to be happening in the periphery, perhaps even skull where the diffusion signal may not be optimized. I believe we need to implement some regularization procedure, perhaps just on the minimum and maximum allowable eigenvalues to correct this. This could be performed just on DT. I will look into this and see if I can come up with a quick fix for this. Future versions of the software should also be able to overcome this rendering error.
Best,
Russell
Threaded View
| Title | Author | Date |
|---|---|---|
| Ehsan Misaghi | Nov 29, 2015 | |
| Russell Glenn | Nov 29, 2015 | |
| Ehsan Misaghi | Nov 30, 2015 | |
| Emilie McKinnon | Nov 30, 2015 | |
| Ehsan Misaghi | Nov 29, 2015 | |
